SMTL ID : 4guv.3 (3 other biounits)

TetX derivatized with Xenon

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.73 Å

Oligo State

monomer

Ligands

1 x FAD: FLAVIN-ADENINE DINUCLEOTIDE(Non-covalent)

FAD.1: 28 residues within 4Å: Chain A: I.32, G.33, G.34, G.35, P.36, V.37, G.38, Y.55, E.56, R.57, D.58, L.70, R.127, R.131, R.147, K.148, L.149, A.177, N.178, G.179, Q.202, L.297, G.320, D.321, P.328, Q.332, G.333, V.334 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:L.297, A:P.328 Hydrogen bonds: A:G.34, A:G.34, A:G.35, A:V.37, A:G.38, A:R.57, A:R.57, A:D.58, A:R.127, A:R.127, A:R.131, A:L.149, A:L.149, A:N.178, A:D.321, A:V.334 pi-Cation interactions: A:R.57, A:R.127

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 3 residues within 4Å: Chain A: E.62, A.63, R.64 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:R.64 Salt bridges: A:R.64 SO4.3: 2 residues within 4Å: Chain A: R.147, K.166 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.147, A:K.166 SO4.4: 2 residues within 4Å: Chain A: K.148, K.183 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.148

2 x XE: XENON(Non-covalent)

XE.5: 5 residues within 4Å: Chain A: L.233, I.247, F.277, Y.284, I.288 No protein-ligand interaction detected (PLIP) XE.6: 7 residues within 4Å: Chain A: N.231, I.247, F.249, F.272, L.273, E.276, F.277 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Volkers, G. et al., Putative dioxygen-binding sites and recognition of tigecycline and minocycline in the tetracycline-degrading monooxygenase TetX. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-04-10

Peptides

TetX2 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

TetX2 protein

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