SMTL ID : 4h5v.1

HSC70 NBD with Mg

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 7 residues within 4Å: Chain A: G.11, T.12, K.70, P.146, E.174, T.203 Ligands: MG.2 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:T.12, A:T.12, A:E.174, A:T.203 Water bridges: A:K.70, A:K.70, A:T.203, A:T.203 Salt bridges: A:K.70 SO4.4: 3 residues within 4Å: Chain A: I.296, T.297, R.300 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:T.297 Salt bridges: A:R.300 SO4.5: 3 residues within 4Å: Chain A: E.26, I.27, R.35 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:V.25, A:I.27 Salt bridges: A:R.35

1 x MG: MAGNESIUM ION(Non-functional Binders)

MG.2: 1 residues within 4Å: Ligands: SO4.1 No protein-ligand interaction detected (PLIP)

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 4 residues within 4Å: Chain A: T.12, T.13, Y.14, G.201 Ligand excluded by PLIP

4 x GOL: GLYCEROL(Non-functional Binders)

GOL.6: 9 residues within 4Å: Chain A: T.12, K.70, R.71, R.75, Y.148, F.149, Q.153, T.203, T.225 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:T.12, A:R.71, A:R.75, A:Q.153 Water bridges: A:H.226 GOL.7: 2 residues within 4Å: Chain A: N.150, D.151 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.151 Water bridges: A:S.152 GOL.8: 3 residues within 4Å: Chain A: N.34, R.35, T.36 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:G.33, A:R.35, A:T.36, A:T.36 Water bridges: A:N.34 GOL.10: 2 residues within 4Å: Chain A: R.261, T.264 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.261 Water bridges: A:R.260, A:R.261, A:T.264

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.9: 3 residues within 4Å: Chain A: G.223, D.224, T.225 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:D.224, A:D.224, A:T.225

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, Z. et al., New crystal structures of HSC-70 ATP binding domain confirm the role of individual binding pockets and suggest a new method of inhibition. Biochimie (2015)

Release Date

2014-03-19

Peptides

Heat shock cognate 71 kDa protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Heat shock cognate 71 kDa protein

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