SMTL ID : 4hcp.1

crystal structure of Burkholderia pseudomallei effector protein chbp in complex with nedd8

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.52 Å

Oligo State

hetero-1-1-mer

Ligands

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: R.8, N.126, Y.239, D.240, F.241, R.242 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.126, A:F.241, A:R.242 Salt bridges: A:R.8

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 7 residues within 4Å: Chain A: N.34, I.49, A.52, I.53 Chain B: T.11, G.12, K.13 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Hydrogen bonds: B:G.12, A:N.34, A:I.53

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yao, Q. et al., Structural mechanism of ubiquitin and NEDD8 deamidation catalyzed by bacterial effectors that induce macrophage-specific apoptosis. Proc.Natl.Acad.Sci.USA (2012)

Release Date

2012-11-21

Peptides

Putative ATP/GTP binding protein: A
NEDD8: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Putative ATP/GTP binding protein

NEDD8

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