SMTL ID : 4hg7.1 (1 other biounit)

Crystal Structure of an MDM2/Nutlin-3a complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

1 x NUT: 4-({(4S,5R)-4,5-bis(4-chlorophenyl)-2-[4-methoxy-2-(propan-2-yloxy)phenyl]-4,5-dihydro-1H-imidazol-1-yl}carbonyl)piperazin-2-one(Non-covalent)

NUT.1: 12 residues within 4Å: Chain A: L.43, G.47, I.50, M.51, Q.61, H.62, V.64, V.82, H.85, I.88, Y.89 Ligands: SO4.2 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.43, A:I.50, A:I.50, A:V.64, A:V.82, A:V.82, A:I.88 pi-Stacking: A:H.85

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: Q.60, Q.61, H.62 Ligands: NUT.1 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:Q.60, A:Q.61, A:H.62 Salt bridges: A:H.62

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Anil, B. et al., The structure of an MDM2-Nutlin-3a complex solved by the use of a validated MDM2 surface-entropy reduction mutant. Acta Crystallogr.,Sect.D (2013)

Release Date

2013-07-31

Peptides

E3 ubiquitin-protein ligase Mdm2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 ubiquitin-protein ligase Mdm2

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