SMTL ID : 4hod.1 (1 other biounit)

Crystal structure of LeuT-E290S with bound Cl

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.30 Å

Oligo State

monomer

Ligands

1 x LEU: LEUCINE(Non-covalent)

LEU.1: 15 residues within 4Å: Chain A: N.21, A.22, G.24, L.25, G.26, N.27, V.104, Y.108, F.253, T.254, S.256, F.259, S.355, I.359 Ligands: NA.2 10 PLIP interactions: 9 interactions with chain A, 1 Ligand-Ligand interactions Hydrophobic interactions: A:V.104, A:F.253, A:F.259 Hydrogen bonds: A:G.24, A:G.26, A:N.27, A:T.254, A:S.256, A:S.256, L.1

2 x NA: SODIUM ION(Non-functional Binders)

NA.2: 7 residues within 4Å: Chain A: A.22, V.23, G.24, N.27, T.254, N.286 Ligands: LEU.1 6 PLIP interactions: 2 Ligand-Ligand interactions, 4 interactions with chain A Hydrogen bonds: L.1, L.1, A:G.24, A:N.27, A:T.254, A:N.286 NA.3: 6 residues within 4Å: Chain A: G.20, V.23, G.24, A.351, T.354, S.355 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.20

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 5 residues within 4Å: Chain A: F.31, Y.47, Q.250, T.254, S.290 Ligand excluded by PLIP

5 x BOG: octyl beta-D-glucopyranoside(Non-covalent)

BOG.5: 4 residues within 4Å: Chain A: L.53, P.445, R.446, Y.448 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.53, A:Y.448 Hydrogen bonds: A:R.446 BOG.6: 3 residues within 4Å: Chain A: I.120, L.166, F.167 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:I.120, A:F.167, A:F.167 BOG.7: 7 residues within 4Å: Chain A: P.164, L.166, Y.169, F.388, H.391, F.395 Ligands: BOG.8 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.388 Hydrogen bonds: A:P.164 BOG.8: 6 residues within 4Å: Chain A: K.163, H.391, L.392, F.395 Ligands: BOG.7, BOG.9 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:H.391, A:L.392 Hydrogen bonds: A:K.163 BOG.9: 4 residues within 4Å: Chain A: I.161, F.395, L.396 Ligands: BOG.8 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:I.161, A:I.161, A:F.395, A:L.396

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kantcheva, A.K. et al., The chloride binding site of Neurotransmitter Sodium Symporters. Proc.Natl.Acad.Sci.USA (2013)

Release Date

2013-05-08

Peptides

Transporter: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Transporter

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