- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x LEU: LEUCINE(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
NA.2: 7 residues within 4Å:- Chain A: A.22, V.23, G.24, N.27, T.254, N.286
- Ligands: LEU.1
6 PLIP interactions:4 interactions with chain A, 2 Ligand-Ligand interactions- Hydrogen bonds: A:G.24, A:N.27, A:N.286, A:N.286, L.1, L.1
NA.3: 6 residues within 4Å:- Chain A: G.20, V.23, G.24, A.351, T.354, S.355
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:S.355
NA.11: 7 residues within 4Å:- Chain B: A.22, V.23, G.24, N.27, T.254, N.286
- Ligands: LEU.10
6 PLIP interactions:4 interactions with chain B, 2 Ligand-Ligand interactions- Hydrogen bonds: B:G.24, B:N.27, B:N.27, B:N.286, L.10, L.10
NA.12: 6 residues within 4Å:- Chain B: G.20, V.23, G.24, A.351, T.354, S.355
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:T.354, B:T.354
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 10 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
BOG.5: 4 residues within 4Å:- Chain A: L.53, P.445, R.446, Y.448
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:L.53, A:Y.448
- Hydrogen bonds: A:R.446
BOG.6: 3 residues within 4Å:- Chain A: I.120, L.166, F.167
3 PLIP interactions:3 interactions with chain A- Hydrophobic interactions: A:I.120, A:F.167, A:F.167
BOG.7: 7 residues within 4Å:- Chain A: P.164, L.166, Y.169, F.388, H.391, F.395
- Ligands: BOG.8
2 PLIP interactions:2 interactions with chain A- Hydrophobic interactions: A:F.388
- Hydrogen bonds: A:P.164
BOG.8: 8 residues within 4Å:- Chain A: K.163, H.391, L.392, F.395
- Chain B: W.484, F.488
- Ligands: BOG.7, BOG.9
8 PLIP interactions:5 interactions with chain B, 3 interactions with chain A- Hydrophobic interactions: B:W.484, B:F.488, B:F.488, B:F.488, A:H.391, A:L.392
- Hydrogen bonds: B:W.484, A:K.163
BOG.9: 14 residues within 4Å:- Chain A: I.161, F.395, L.396
- Chain B: M.476, E.477, E.478, T.479, H.480, W.481, V.483, W.484, I.485, R.487
- Ligands: BOG.8
11 PLIP interactions:7 interactions with chain B, 4 interactions with chain A- Hydrophobic interactions: B:W.484, B:I.485, A:I.161, A:I.161, A:F.395, A:L.396
- Hydrogen bonds: B:E.477, B:T.479, B:T.479, B:R.487, B:R.487
BOG.14: 4 residues within 4Å:- Chain B: L.53, P.445, R.446, Y.448
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:L.53, B:Y.448
- Hydrogen bonds: B:R.446
BOG.15: 3 residues within 4Å:- Chain B: I.120, L.166, F.167
3 PLIP interactions:3 interactions with chain B- Hydrophobic interactions: B:I.120, B:F.167, B:F.167
BOG.16: 7 residues within 4Å:- Chain B: P.164, L.166, Y.169, F.388, H.391, F.395
- Ligands: BOG.17
2 PLIP interactions:2 interactions with chain B- Hydrophobic interactions: B:F.388
- Hydrogen bonds: B:P.164
BOG.17: 8 residues within 4Å:- Chain A: W.484, F.488
- Chain B: K.163, H.391, L.392, F.395
- Ligands: BOG.16, BOG.18
8 PLIP interactions:3 interactions with chain B, 5 interactions with chain A- Hydrophobic interactions: B:H.391, B:L.392, A:W.484, A:F.488, A:F.488, A:F.488
- Hydrogen bonds: B:K.163, A:W.484
BOG.18: 14 residues within 4Å:- Chain A: M.476, E.477, E.478, T.479, H.480, W.481, V.483, W.484, I.485, R.487
- Chain B: I.161, F.395, L.396
- Ligands: BOG.17
10 PLIP interactions:6 interactions with chain A, 4 interactions with chain B- Hydrophobic interactions: A:W.484, A:I.485, B:I.161, B:I.161, B:F.395, B:L.396
- Hydrogen bonds: A:E.477, A:T.479, A:R.487, A:R.487
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kantcheva, A.K. et al., The chloride binding site of Neurotransmitter Sodium Symporters. Proc.Natl.Acad.Sci.USA (2013)
- Release Date
- 2013-05-08
- Peptides
- Transporter: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A - Membrane
-
We predict this structure to be a membrane protein.
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 3.30 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x LEU: LEUCINE(Non-covalent)
- 4 x NA: SODIUM ION(Non-functional Binders)
- 2 x CL: CHLORIDE ION(Non-functional Binders)
- 10 x BOG: octyl beta-D-glucopyranoside(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Kantcheva, A.K. et al., The chloride binding site of Neurotransmitter Sodium Symporters. Proc.Natl.Acad.Sci.USA (2013)
- Release Date
- 2013-05-08
- Peptides
- Transporter: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A - Membrane
-
We predict this structure to be a membrane protein.