SMTL ID : 4hqb.1 (1 other biounit)

Crystal structure of DdrB from Deinococcus radiodurans bound to ssDNA

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

homo-pentamer

Ligands

1 x DT- DT- DT- DT: 5'-D(*TP*TP*TP*T)-3'(Non-covalent)

DT-DT-DT-DT.1: 11 residues within 4Å: Chain A: R.68, W.70, L.78, I.80, G.83, A.85, R.87, K.112 Chain E: G.138, K.139, Q.141 Protein-ligand interaction information (PLIP) not available

1 x DT- DT- DT- DT- DT: 5'-D(P*TP*TP*TP*TP*T)-3'(Non-covalent)

DT-DT-DT-DT-DT.2: 19 residues within 4Å: Chain A: V.94, L.99, K.100, L.101, R.136, G.137, G.138, K.139 Chain B: R.68, W.70, P.73, L.78, I.80, G.83, H.84, A.85, R.87, R.109, G.110 Protein-ligand interaction information (PLIP) not available

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sugiman-Marangos, S.N. et al., Crystal structure of the DdrB/ssDNA complex from Deinococcus radiodurans reveals a DNA binding surface involving higher-order oligomeric states. Nucleic Acids Res. (2013)

Release Date

2013-09-04

Peptides

Single-stranded DNA-binding protein DdrB: ABCDE

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

Single-stranded DNA-binding protein DdrB

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