SMTL ID : 4i19.1

The crystal structure of an epoxide hydrolase from Streptomyces carzinostaticus subsp. neocarzinostaticus.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

homo-dimer

Ligands

4 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: D.177, I.178, F.181, M.238, H.306, P.314 3 PLIP interactions: 3 interactions with chain A Water bridges: A:D.177, A:H.306 Salt bridges: A:H.306 ACT.2: 8 residues within 4Å: Chain A: D.177, A.180, F.181, L.184, L.201, L.202, Q.203 Ligands: FMT.5 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:F.181 Hydrogen bonds: A:Q.203 ACT.13: 6 residues within 4Å: Chain B: D.177, I.178, F.181, M.238, H.306, P.314 3 PLIP interactions: 3 interactions with chain B Water bridges: B:D.177, B:H.306 Salt bridges: B:H.306 ACT.14: 8 residues within 4Å: Chain B: D.177, A.180, F.181, L.184, L.201, L.202, Q.203 Ligands: FMT.17 2 PLIP interactions: 2 interactions with chain B Hydrophobic interactions: B:F.181 Hydrogen bonds: B:Q.203

20 x FMT: FORMIC ACID(Non-functional Binders)

FMT.3: 3 residues within 4Å: Chain A: P.88, D.117, R.119 Ligand excluded by PLIP FMT.4: 3 residues within 4Å: Chain A: L.184, S.322 Ligands: FMT.5 Ligand excluded by PLIP FMT.5: 8 residues within 4Å: Chain A: L.184, L.202, Q.203, S.322, F.350 Ligands: ACT.2, FMT.4, FMT.6 Ligand excluded by PLIP FMT.6: 7 residues within 4Å: Chain A: T.204, N.205, L.345, R.348, D.349, F.350 Ligands: FMT.5 Ligand excluded by PLIP FMT.7: 5 residues within 4Å: Chain A: D.177, F.230, M.238, W.270, H.364 Ligand excluded by PLIP FMT.8: 2 residues within 4Å: Chain A: S.217, D.218 Ligand excluded by PLIP FMT.9: 6 residues within 4Å: Chain A: E.278, D.279, A.280, V.281, D.282 Ligands: FMT.10 Ligand excluded by PLIP FMT.10: 5 residues within 4Å: Chain A: D.279, A.280, E.369, E.370 Ligands: FMT.9 Ligand excluded by PLIP FMT.11: 6 residues within 4Å: Chain A: I.16, L.19, K.20, W.52, R.53, W.58 Ligand excluded by PLIP FMT.12: 5 residues within 4Å: Chain A: P.314, I.315, T.316, S.317, L.318 Ligand excluded by PLIP FMT.15: 3 residues within 4Å: Chain B: P.88, D.117, R.119 Ligand excluded by PLIP FMT.16: 3 residues within 4Å: Chain B: L.184, S.322 Ligands: FMT.17 Ligand excluded by PLIP FMT.17: 8 residues within 4Å: Chain B: L.184, L.202, Q.203, S.322, F.350 Ligands: ACT.14, FMT.16, FMT.18 Ligand excluded by PLIP FMT.18: 7 residues within 4Å: Chain B: T.204, N.205, L.345, R.348, D.349, F.350 Ligands: FMT.17 Ligand excluded by PLIP FMT.19: 5 residues within 4Å: Chain B: D.177, F.230, M.238, W.270, H.364 Ligand excluded by PLIP FMT.20: 2 residues within 4Å: Chain B: S.217, D.218 Ligand excluded by PLIP FMT.21: 6 residues within 4Å: Chain B: E.278, D.279, A.280, V.281, D.282 Ligands: FMT.22 Ligand excluded by PLIP FMT.22: 5 residues within 4Å: Chain B: D.279, A.280, E.369, E.370 Ligands: FMT.21 Ligand excluded by PLIP FMT.23: 6 residues within 4Å: Chain B: I.16, L.19, K.20, W.52, R.53, W.58 Ligand excluded by PLIP FMT.24: 5 residues within 4Å: Chain B: P.314, I.315, T.316, S.317, L.318 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tan, K. et al., The crystal structure of an epoxide hydrolase from Streptomyces carzinostaticus subsp. neocarzinostaticus. To be Published

Release Date

2012-12-05

Peptides

Epoxide hydrolase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Epoxide hydrolase

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