SMTL ID : 4i9y.1 (5 other biounits)

Structure of the C-terminal domain of Nup358

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

3 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 11 residues within 4Å: Chain A: R.58, F.63, V.64, Q.66, A.104, N.105, V.116, H.124, L.125, K.128, H.129 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.105, A:N.105 Water bridges: A:R.58, A:Q.66, A:H.129 GOL.2: 3 residues within 4Å: Chain A: H.3, T.5, N.30 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.30 GOL.5: 5 residues within 4Å: Chain A: P.2, H.3, M.4, E.26, F.134 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:H.3 Water bridges: A:E.26

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain A: H.3, M.4 Ligand excluded by PLIP

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.4: 6 residues within 4Å: Chain A: G.1, P.2, F.28, I.31, V.93, L.100 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lin, D.H. et al., Structural and Functional Analysis of the C-Terminal Domain of Nup358/RanBP2. J.Mol.Biol. (2013)

Release Date

2013-01-30

Peptides

E3 SUMO-protein ligase RanBP2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E3 SUMO-protein ligase RanBP2

Related Entries With Identical Sequence