Toggle navigation
Modelling
myWorkspace
Alignment Mode
User Template Mode
DeepView Project Mode
Modelling API
Template Library
Repository
SWISS-MODEL Repository
Repository API
3D-Beacons API
Annotation Projects
TBvar3D
Tools
Structure Assessment
Structure Comparison
QMEAN
Documentation
SWISS-MODEL
Examples
Video Tutorial
New Features
SWISS-MODEL Repository
QMEAN
Structure Assessment
Structure Comparison
TBvar3D
Protein Structure Course
References
Log in
Create Account
SMTL ID : 4iab.3
(3 other biounits)
Crystal structure of a putative monosaccharide binding protein (BACUNI_03039) from Bacteroides uniformis ATCC 8492 at 1.70 A resolution
Coordinates
PDB Format
Compare
Method
X-RAY DIFFRACTION 1.66 Å
Oligo State
homo-tetramer
Ligands
4 x
UNL
:
UNKNOWN LIGAND
UNL.1:
11 residues within 4Å:
Chain A:
K.39
,
N.49
,
E.76
,
N.81
,
H.83
,
L.84
,
L.87
,
N.92
,
E.125
,
W.127
Chain B:
R.142
8
PLIP interactions
:
6 interactions with chain A
,
2 interactions with chain B
Hydrogen bonds:
A:K.39
,
A:N.49
,
A:N.81
,
A:N.81
,
A:N.92
,
A:E.125
,
B:R.142
,
B:R.142
UNL.3:
13 residues within 4Å:
Chain A:
R.142
Chain B:
K.39
,
N.49
,
E.76
,
I.78
,
N.81
,
H.83
,
L.84
,
L.87
,
N.92
,
Y.108
,
E.125
,
W.127
12
PLIP interactions
:
10 interactions with chain B
,
2 interactions with chain A
Hydrogen bonds:
B:K.39
,
B:N.49
,
B:E.76
,
B:E.76
,
B:N.81
,
B:N.81
,
B:N.92
,
B:Y.108
,
B:E.125
,
B:E.125
,
A:R.142
,
A:R.142
UNL.5:
11 residues within 4Å:
Chain C:
K.39
,
N.49
,
E.76
,
N.81
,
H.83
,
L.84
,
L.87
,
N.92
,
E.125
,
W.127
Chain D:
R.142
9
PLIP interactions
:
7 interactions with chain C
,
2 interactions with chain D
Hydrogen bonds:
C:K.39
,
C:N.49
,
C:N.81
,
C:N.81
,
C:H.83
,
C:N.92
,
C:E.125
,
D:R.142
,
D:R.142
UNL.7:
13 residues within 4Å:
Chain C:
R.142
Chain D:
K.39
,
N.49
,
E.76
,
I.78
,
N.81
,
H.83
,
L.84
,
L.87
,
N.92
,
Y.108
,
E.125
,
W.127
12
PLIP interactions
:
2 interactions with chain C
,
10 interactions with chain D
Hydrogen bonds:
C:R.142
,
C:R.142
,
D:K.39
,
D:N.49
,
D:E.76
,
D:E.76
,
D:N.81
,
D:N.81
,
D:H.83
,
D:N.92
,
D:E.125
,
D:E.125
4 x
PEG
:
DI(HYDROXYETHYL)ETHER
(Non-functional Binders)
PEG.2:
3 residues within 4Å:
Chain A:
G.131
,
M.132
Chain B:
Y.63
1
PLIP interactions
:
1 interactions with chain B
Water bridges:
B:R.46
PEG.4:
3 residues within 4Å:
Chain A:
Y.63
Chain B:
G.131
,
M.132
1
PLIP interactions
:
1 interactions with chain B
Water bridges:
B:V.130
PEG.6:
3 residues within 4Å:
Chain C:
G.131
,
M.132
Chain D:
Y.63
1
PLIP interactions
:
1 interactions with chain D
Water bridges:
D:R.46
PEG.8:
3 residues within 4Å:
Chain C:
Y.63
Chain D:
G.131
,
M.132
1
PLIP interactions
:
1 interactions with chain D
Water bridges:
D:V.130
Links
RCSB
PDBe
PDBe-KB
PDBj
PDBsum
CATH
PLIP
Citation
Joint Center for Structural Genomics (JCSG), Crystal structure of a hypothetical protein (BACUNI_03039) from Bacteroides uniformis ATCC 8492 at 1.66 A resolution. To be published
Release Date
2013-02-27
Peptides
hypothetical protein:
A
B
C
D
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
C
B
D
C
C
D
D
Export Alignment
FASTA format
Clustal Format
PNG Image
Secondary Structure
None
DSSP
PSIPRED
SSpro
Colour Scheme
Fade Mismatches
Enhance Mismatches
Chain
Unique Chain
Rainbow
2° Structure
Bfactor
Bfactor Range
SOA
Entropy
Clustal
Hydrophobic
Size
Charged
Polar
Proline
Ser/Thr
Cysteine
Aliphatic
Aromatic
No Colour
Background
3D Viewer
NGL
PV
2D
FASTA
Multi FASTA
ClustalW
PNG
hypothetical protein
Toggle Identical (AC)
Toggle Identical (BD)
Related Entries With Identical Sequence
4iab.1
|
4iab.2
|
4iab.4
Cartoon
Cartoon
Tube
Trace
Lines
Ball+Stick
Licorice
Hyperball
Rope
Surface
Spacefill
Outline
Fog
Background
Transparent
Resolution
Low
Medium
High
Extreme