SMTL ID : 4ibb.1 (1 other biounit)

Ebola virus VP35 bound to small molecule

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

1 x 1DK: {4-[(5R)-3-hydroxy-2-oxo-4-(thiophen-2-ylcarbonyl)-5-(2,4,5-trimethylphenyl)-2,5-dihydro-1H-pyrrol-1-yl]phenyl}acetic acid(Non-covalent)

1DK.1: 11 residues within 4Å: Chain A: A.10, Q.30, Q.33, V.34, K.37, K.40, V.83, I.84, I.86, D.91, F.117 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:Q.33, A:K.37, A:K.37, A:K.40, A:I.84, A:I.84, A:I.84, A:I.86 Hydrogen bonds: A:Q.30 Water bridges: A:A.10 Salt bridges: A:K.40

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Brown, C.S. et al., In Silico Derived Small Molecules Bind the Filovirus VP35 Protein and Inhibit Its Polymerase Cofactor Activity. J.Mol.Biol. (2014)

Release Date

2014-02-26

Peptides

Polymerase cofactor VP35: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polymerase cofactor VP35

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