SMTL ID : 4idt.1

Crystal Structure of NIK with 11-bromo-5,6,7,8-tetrahydropyrimido[4',5':3,4]cyclohepta[1,2-b]indol-2-amine (T28)

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x T28: 11-bromo-5,6,7,8-tetrahydropyrimido[4',5':3,4]cyclohepta[1,2-b]indol-2-amine(Non-covalent)

T28.1: 17 residues within 4Å: Chain A: L.82, G.83, R.84, G.85, V.90, A.103, K.105, M.145, E.146, L.147, L.148, G.151, S.152, Q.155, L.198, C.209, D.210 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.82, A:L.198, A:L.198, A:D.210 Hydrogen bonds: A:E.146, A:L.148 Water bridges: A:R.84, A:R.84, A:S.152 T28.2: 19 residues within 4Å: Chain B: L.82, G.83, R.84, G.85, S.86, V.90, A.103, K.105, V.129, M.145, E.146, L.147, L.148, G.151, S.152, Q.155, L.198, C.209, D.210 8 PLIP interactions: 8 interactions with chain B Hydrophobic interactions: B:L.82, B:L.198, B:D.210 Hydrogen bonds: B:E.146, B:L.148 Water bridges: B:R.84, B:R.84, B:D.195

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Li, K. et al., Inhibiting NF-KB-inducing kinase (NIK): Discovery, structure-based design, synthesis, structure activity relationship, and co-crystal structures. Bioorg.Med.Chem.Lett. (2013)

Release Date

2013-04-17

Peptides

Mitogen-activated protein kinase kinase kinase 14: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Mitogen-activated protein kinase kinase kinase 14

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