SMTL ID : 4j55.1

Crystal Structure of Multidrug Resistant HIV-1 Protease Clinical isolate PR20 with the potent antiviral inhibitor GRL-02031

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.31 Å

Oligo State

homo-dimer

Ligands

2 x 031: (3aS,5R,6aR)-hexahydro-2H-cyclopenta[b]furan-5-yl [(1S,2R)-1-benzyl-2-hydroxy-3-([(4-methoxyphenyl)sulfonyl]{[(2R)-5-oxopyrrolidin-2-yl]methyl}amino)propyl]carbamate(Non-covalent)

031.1: 21 residues within 4Å: Chain A: L.23, D.25, G.27, A.28, D.29, N.30, G.48, G.49, I.50, V.82 Chain B: D.25, G.27, A.28, D.29, N.30, I.32, V.47, G.48, G.49, I.50, V.82 14 PLIP interactions: 7 interactions with chain B, 7 interactions with chain A Hydrophobic interactions: B:A.28, B:I.32, B:V.82 Hydrogen bonds: B:G.27, B:D.29, B:N.30, A:D.25, A:G.27, A:G.27, A:D.29 Salt bridges: B:D.25, A:D.25 Water bridges: A:I.50, A:I.50 031.2: 5 residues within 4Å: Chain A: P.44, K.45, M.46, K.55, V.56 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:P.44, A:K.55, A:K.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Agniswamy, J. et al., Extreme Multidrug Resistant HIV-1 Protease with 20 Mutations Is Resistant to Novel Protease Inhibitors with P1'-Pyrrolidinone or P2-Tris-tetrahydrofuran. J.Med.Chem. (2013)

Release Date

2013-05-15

Peptides

Protease: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protease

Related Entries With Identical Sequence