SMTL ID : 4j99.5 (5 other biounits)

Crystal Structure of FGF Receptor 2 (FGFR2) Kinase Domain Harboring the Gain-of-Function K659T Mutation.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.85 Å

Oligo State

homo-dimer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 4 residues within 4Å: Chain A: R.181, R.205, Y.213, T.215 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.213 Salt bridges: A:R.181, A:R.205 SO4.3: 4 residues within 4Å: Chain A: T.191, E.192, N.193, V.195 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:T.191, A:N.193, A:N.193 SO4.4: 6 residues within 4Å: Chain B: R.181, R.205, Y.213, K.214, T.215, T.216 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:Y.213, B:T.216 Water bridges: B:T.216 Salt bridges: B:R.181, B:R.205 SO4.6: 2 residues within 4Å: Chain B: R.34, D.35 1 PLIP interactions: 1 interactions with chain B Water bridges: B:R.34

2 x ACP: PHOSPHOMETHYLPHOSPHONIC ACID ADENYLATE ESTER(Covalent)(Non-covalent)

ACP.2: 19 residues within 4Å: Chain A: L.43, G.44, E.45, G.46, A.47, V.51, A.71, K.73, I.104, V.120, E.121, Y.122, A.123, N.127, D.182, R.186, N.187, L.189, D.200 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:A.47, A:E.121, A:A.123, A:N.127, A:D.182, A:R.186, A:N.187, A:D.200 Salt bridges: A:K.73 ACP.5: 19 residues within 4Å: Chain B: L.43, G.44, E.45, G.46, A.47, V.51, A.71, K.73, I.104, V.120, E.121, Y.122, A.123, N.127, D.182, R.186, N.187, L.189, D.200 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:A.47, B:E.121, B:A.123, B:N.127, B:N.187 Water bridges: B:D.182, B:D.182, B:D.182 Salt bridges: B:K.73

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chen, H. et al., Cracking the Molecular Origin of Intrinsic Tyrosine Kinase Activity through Analysis of Pathogenic Gain-of-Function Mutations. Cell Rep (2013)

Release Date

2013-08-07

Peptides

Fibroblast growth factor receptor 2: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Fibroblast growth factor receptor 2

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