SMTL ID : 4jbd.1

Crystal structure of Pput_1285, a putative hydroxyproline epimerase from Pseudomonas putida f1 (target EFI-506500), open form, space group I2, bound citrate

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.30 Å

Oligo State

homo-dimer

Ligands

4 x CIT: CITRIC ACID(Non-functional Binders)

CIT.1: 10 residues within 4Å: Chain A: E.36, M.109, C.110, G.111, H.112, N.184, H.230, C.258, G.259, T.260 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:T.260 Hydrogen bonds: A:G.111, A:H.112, A:N.184, A:G.259, A:T.260, A:T.260 Water bridges: A:M.109, A:H.112, A:H.230, A:H.230 Salt bridges: A:H.112 CIT.2: 4 residues within 4Å: Chain A: R.160, Y.161, R.162, Q.163 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:Y.161, A:Q.163, A:Q.163 Water bridges: A:R.160, A:R.160 Salt bridges: A:R.160 CIT.3: 10 residues within 4Å: Chain B: E.36, M.109, C.110, G.111, H.112, N.184, H.230, C.258, G.259, T.260 12 PLIP interactions: 12 interactions with chain B Hydrophobic interactions: B:T.260 Hydrogen bonds: B:G.111, B:H.112, B:N.184, B:G.259, B:T.260, B:T.260 Water bridges: B:M.109, B:H.112, B:H.230, B:H.230 Salt bridges: B:H.112 CIT.4: 4 residues within 4Å: Chain B: R.160, Y.161, R.162, Q.163 6 PLIP interactions: 6 interactions with chain B Hydrogen bonds: B:Y.161, B:Q.163, B:Q.163 Water bridges: B:R.160, B:R.160 Salt bridges: B:R.160

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Vetting, M.W. et al., Crystal structure of pput_1285, a putative hydroxyproline epimerase from pseudomonas putida f1 (target efi-506500), open form, space group i2, bound citrate. To be Published

Release Date

2013-03-13

Peptides

Proline racemase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Proline racemase

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