SMTL ID : 4jx1.4 (3 other biounits)

Crystal structure of reduced Cytochrome P450cam-putidaredoxin complex bound to camphor and 5-exo-hydroxycamphor

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.09 Å

Oligo State

hetero-1-1-mer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 31 residues within 4Å: Chain A: P.101, T.102, Q.109, R.113, V.120, L.245, L.246, G.249, G.250, T.253, V.254, F.257, L.290, L.295, V.296, D.298, R.300, Q.323, T.350, F.351, G.352, H.356, L.357, C.358, L.359, G.360, L.363, A.364, E.367, I.368 Ligands: CAH.3 19 PLIP interactions: 18 interactions with chain A, 1 Ligand-Water interactions Hydrophobic interactions: A:V.254, A:F.257, A:L.295, A:V.296, A:Q.323, A:T.350, A:F.351, A:L.359 Hydrogen bonds: A:T.102, A:Q.109, A:D.298, A:Q.323 Salt bridges: A:R.113, A:R.300, A:H.356, A:H.356 pi-Stacking: A:F.351 Metal complexes: A:C.358, H2O.2

1 x CAM: CAMPHOR(Non-covalent)

CAM.2: 9 residues within 4Å: Chain A: Y.97, F.99, M.185, T.186, F.194, V.248, I.396, V.397 Ligands: CAH.3 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:Y.97, A:F.99, A:F.194, A:V.248

1 x CAH: 5-EXO-HYDROXYCAMPHOR(Non-covalent)

CAH.3: 12 residues within 4Å: Chain A: F.88, T.102, L.245, V.248, G.249, T.253, V.296, D.298, I.396, V.397 Ligands: HEM.1, CAM.2 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.88, A:T.102, A:I.396, A:V.397

1 x CA: CALCIUM ION(Non-covalent)

CA.4: 2 residues within 4Å: Chain A: E.199, D.203 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:E.199, A:D.203, A:D.203, H2O.2

1 x FES: FE2/S2 (INORGANIC) CLUSTER(Non-covalent)

FES.5: 14 residues within 4Å: Chain B: M.31, G.44, C.46, G.47, G.48, A.50, S.51, C.52, A.53, T.54, C.55, M.77, L.91, C.93 4 PLIP interactions: 4 interactions with chain B, Metal complexes: B:C.46, B:C.52, B:C.55, B:C.93

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tripathi, S. et al., Structural basis for effector control and redox partner recognition in cytochrome P450. Science (2013)

Release Date

2013-06-19

Peptides

Camphor 5-monooxygenase: A
Putidaredoxin: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

B
H

Camphor 5-monooxygenase

Putidaredoxin

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