- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CO: COBALT (II) ION(Non-covalent)
- 2 x FE2: FE (II) ION(Non-covalent)
FE2.2: 6 residues within 4Å:- Chain A: H.22, H.24, K.137, D.256
- Ligands: CO.1, HT5.3
4 PLIP interactions:3 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:H.22, A:H.24, A:D.256, H2O.10
FE2.18: 6 residues within 4Å:- Chain B: H.22, H.24, K.137, D.256
- Ligands: CO.17, HT5.19
4 PLIP interactions:3 interactions with chain B, 1 Ligand-Water interactions- Metal complexes: B:H.22, B:H.24, B:D.256, H2O.21
- 2 x HT5: (4S)-4-(decanoylamino)-5-hydroxy-3,4-dihydro-2H-thiophenium(Non-covalent)
HT5.3: 23 residues within 4Å:- Chain A: H.24, V.27, Y.97, K.137, H.170, H.199, R.223, L.226, D.256, C.258, I.261, I.263, T.265, A.266, K.267, Y.270, K.271, L.274, A.275, W.278
- Ligands: CO.1, FE2.2, PG4.4
14 PLIP interactions:14 interactions with chain A- Hydrophobic interactions: A:L.226, A:L.226, A:I.261, A:I.263, A:T.265, A:Y.270, A:K.271, A:L.274, A:A.275, A:W.278
- Hydrogen bonds: A:Y.97, A:R.223
- Water bridges: A:Y.99, A:R.223
HT5.19: 21 residues within 4Å:- Chain B: H.22, H.24, Y.97, K.137, H.170, R.223, L.226, F.229, D.256, C.258, I.261, I.263, T.265, A.266, K.267, K.271, L.274, W.278
- Ligands: CO.17, FE2.18, PG4.20
11 PLIP interactions:11 interactions with chain B- Hydrophobic interactions: B:F.229, B:I.263, B:T.265, B:K.271, B:L.274, B:W.278
- Hydrogen bonds: B:Y.97, B:Y.99, B:R.223
- Water bridges: B:Y.99, B:R.223
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 11 x GOL: GLYCEROL(Non-functional Binders)
GOL.5: 8 residues within 4Å:- Chain A: P.4, L.5, K.8, D.9, S.10, L.130, N.131, K.132
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:L.5, A:L.5, A:S.10, A:L.130, A:K.132
GOL.6: 6 residues within 4Å:- Chain A: S.171, N.172, A.173, H.174, D.202, F.229
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:A.173, A:H.199, A:D.202, A:R.223
GOL.8: 9 residues within 4Å:- Chain A: G.7, K.8, V.83, K.84, G.87
- Chain B: T.186, E.187, E.188, G.189
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:T.186
GOL.10: 7 residues within 4Å:- Chain A: N.160, K.164, G.189, V.190, D.191, K.194
- Ligands: EDO.14
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:N.160, A:K.164, A:D.191
GOL.12: 8 residues within 4Å:- Chain A: D.101, L.102, P.103, F.104, F.106, L.107, D.148, K.151
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:P.103, A:D.148, A:K.151
GOL.15: 6 residues within 4Å:- Chain A: F.59, F.284, I.288, P.289, K.292
- Ligands: EDO.9
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:F.59, A:K.292, A:K.292
GOL.16: 2 residues within 4Å:- Chain A: R.55, Q.58
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:Q.58
GOL.21: 6 residues within 4Å:- Chain B: N.160, K.164, G.189, V.190, D.191, K.194
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.160, B:K.164, B:D.191
- Water bridges: B:G.189
GOL.24: 8 residues within 4Å:- Chain B: P.4, L.5, K.8, D.9, S.10, L.130, N.131, K.132
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:L.5, B:D.9, B:L.130, B:K.132
- Water bridges: B:D.9
GOL.25: 6 residues within 4Å:- Chain B: A.213, D.214, G.246, Y.247, D.249, K.250
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:A.213, B:D.249
GOL.26: 8 residues within 4Å:- Chain B: D.141, S.171, N.172, A.173, H.174, H.199, D.202, F.229
6 PLIP interactions:6 interactions with chain B- Hydrogen bonds: B:D.141, B:N.172, B:A.173, B:H.199, B:D.202, B:R.223
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.7: 3 residues within 4Å:- Chain A: D.214, K.215, G.216
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.214
EDO.9: 6 residues within 4Å:- Chain A: F.18, I.288, K.292, E.298, I.301
- Ligands: GOL.15
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:K.292, A:E.298
EDO.11: 2 residues within 4Å:- Chain A: L.102, F.104
2 PLIP interactions:2 interactions with chain A- Water bridges: A:D.101, A:L.102
EDO.13: 6 residues within 4Å:- Chain A: K.8, M.57, K.62, G.87, I.88, N.89
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:K.8, A:K.62, A:N.89
EDO.14: 5 residues within 4Å:- Chain A: T.186, G.189, V.190, P.192
- Ligands: GOL.10
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:T.186
EDO.22: 3 residues within 4Å:- Chain B: D.233, N.236, F.290
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:N.236
EDO.23: 4 residues within 4Å:- Chain B: I.98, Y.99, I.100, D.101
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Y.99, B:I.100, B:D.101, B:D.101
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hiblot, J. et al., Differential Active Site Loop Conformations Mediate Promiscuous Activities in the Lactonase SsoPox. Plos One (2013)
- Release Date
- 2013-10-02
- Peptides
- Aryldialkylphosphatase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.00 Å
- Oligo State
- homo-dimer
- Ligands
- 2 x CO: COBALT (II) ION(Non-covalent)
- 2 x FE2: FE (II) ION(Non-covalent)
- 2 x HT5: (4S)-4-(decanoylamino)-5-hydroxy-3,4-dihydro-2H-thiophenium(Non-covalent)
- 2 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)
- 11 x GOL: GLYCEROL(Non-functional Binders)
- 7 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hiblot, J. et al., Differential Active Site Loop Conformations Mediate Promiscuous Activities in the Lactonase SsoPox. Plos One (2013)
- Release Date
- 2013-10-02
- Peptides
- Aryldialkylphosphatase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
C