SMTL ID : 4l1m.2 (2 other biounits)

Structure of the first RCC1-like domain of HERC2

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 2 residues within 4Å: Chain A: K.36, D.82 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.82 Salt bridges: A:K.36 SO4.2: 5 residues within 4Å: Chain A: S.268, Q.269, K.285, R.290, T.321 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:S.268, A:S.268 Salt bridges: A:K.285, A:R.290 SO4.3: 4 residues within 4Å: Chain A: C.247, K.248, T.249, K.251 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.248, A:T.249 Salt bridges: A:K.251 SO4.4: 4 residues within 4Å: Chain A: K.63, R.64, H.107, Y.109 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:Y.109 Salt bridges: A:R.64, A:H.107

12 x UNX: UNKNOWN ATOM OR ION(Non-functional Binders)

UNX.5: 4 residues within 4Å: Chain A: H.131, V.142, I.143, S.144 No protein-ligand interaction detected (PLIP) UNX.6: 3 residues within 4Å: Chain A: N.181, Y.182, S.190 No protein-ligand interaction detected (PLIP) UNX.7: 5 residues within 4Å: Chain A: L.205, K.206, T.223, E.224, N.225 No protein-ligand interaction detected (PLIP) UNX.8: 2 residues within 4Å: Chain A: S.81, D.82 No protein-ligand interaction detected (PLIP) UNX.9: 2 residues within 4Å: Chain A: R.128, R.179 No protein-ligand interaction detected (PLIP) UNX.10: 3 residues within 4Å: Chain A: A.59, A.101, A.102 No protein-ligand interaction detected (PLIP) UNX.11: 2 residues within 4Å: Chain A: L.137, E.138 No protein-ligand interaction detected (PLIP) UNX.12: 2 residues within 4Å: Chain A: H.298, R.300 No protein-ligand interaction detected (PLIP) UNX.13: 2 residues within 4Å: Chain A: D.245, G.246 No protein-ligand interaction detected (PLIP) UNX.14: 4 residues within 4Å: Chain A: G.242, G.243, S.244, D.245 No protein-ligand interaction detected (PLIP) UNX.15: 5 residues within 4Å: Chain A: D.277, G.278, Q.279, K.311, K.312 No protein-ligand interaction detected (PLIP) UNX.16: 1 residues within 4Å: Chain A: Y.301 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Tempel, W. et al., Structure of the first RCC1-like domain of HERC2. TO BE PUBLISHED

Release Date

2013-07-03

Peptides

E3 ubiquitin-protein ligase HERC2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

E3 ubiquitin-protein ligase HERC2

Related Entries With Identical Sequence