- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.19 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x MG: MAGNESIUM ION(Non-covalent)
MG.2: 3 residues within 4Å:- Chain A: E.308
- Ligands: PO4.4, DPO.6
3 PLIP interactions:2 interactions with chain A, 1 Ligand-Water interactions- Metal complexes: A:E.308, A:E.308, H2O.11
MG.5: 6 residues within 4Å:- Chain A: K.66
- Chain B: K.28, D.34, R.291
- Ligands: PO4.4, DPO.6
3 PLIP interactions:1 interactions with chain B, 2 Ligand-Water interactions- Metal complexes: B:D.34, H2O.24, H2O.24
MG.8: 3 residues within 4Å:- Chain C: E.308
- Ligands: PO4.10, DPO.12
3 PLIP interactions:2 interactions with chain C, 1 Ligand-Water interactions- Metal complexes: C:E.308, C:E.308, H2O.38
MG.11: 6 residues within 4Å:- Chain C: K.66
- Chain D: K.28, D.34, R.291
- Ligands: PO4.10, DPO.12
3 PLIP interactions:1 interactions with chain D, 2 Ligand-Water interactions- Metal complexes: D:D.34, H2O.51, H2O.51
- 2 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)
SAM.3: 18 residues within 4Å:- Chain A: H.61, N.63, R.94, D.147, L.148, N.162, D.163, I.352
- Chain B: H.32, P.33, D.202, K.204, A.219, Y.273, S.280, G.284, D.285
- Ligands: DPO.6
17 PLIP interactions:10 interactions with chain B, 7 interactions with chain A- Hydrogen bonds: B:D.202, B:K.204, B:Y.273, B:S.280, B:D.285, B:D.285, B:D.285, A:N.63, A:D.147, A:N.162
- Salt bridges: B:D.285, A:H.61, A:D.163
- pi-Stacking: B:Y.273, B:Y.273
- Water bridges: A:K.66, A:S.145
SAM.9: 18 residues within 4Å:- Chain C: H.61, N.63, R.94, D.147, L.148, N.162, D.163, I.352
- Chain D: H.32, P.33, D.202, K.204, A.219, Y.273, S.280, G.284, D.285
- Ligands: DPO.12
17 PLIP interactions:9 interactions with chain D, 8 interactions with chain C- Hydrogen bonds: D:D.202, D:K.204, D:S.280, D:D.285, D:D.285, D:D.285, C:N.63, C:D.147, C:D.147, C:N.162
- Salt bridges: D:D.285, C:H.61, C:D.163
- pi-Stacking: D:Y.273, D:Y.273
- Water bridges: C:K.66, C:S.145
- 2 x DPO: DIPHOSPHATE(Non-covalent)
DPO.6: 14 residues within 4Å:- Chain A: K.66, D.163, E.308, K.313, H.318
- Chain B: K.28, H.32, D.34, K.204, D.285
- Ligands: MG.2, SAM.3, PO4.4, MG.5
10 PLIP interactions:5 interactions with chain B, 5 interactions with chain A- Hydrogen bonds: B:D.34, A:D.163
- Salt bridges: B:K.28, B:K.28, B:H.32, B:K.204, A:K.66, A:K.313, A:H.318
- Water bridges: A:K.66
DPO.12: 14 residues within 4Å:- Chain C: K.66, D.163, E.308, K.313, H.318
- Chain D: K.28, H.32, D.34, K.204, D.285
- Ligands: MG.8, SAM.9, PO4.10, MG.11
9 PLIP interactions:5 interactions with chain D, 4 interactions with chain C- Hydrogen bonds: D:D.34
- Salt bridges: D:K.28, D:K.28, D:H.32, D:K.204, C:K.66, C:K.313, C:H.318
- Water bridges: C:K.66
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, F. et al., Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from Sulfolobus solfataricus. Febs J. (2014)
- Release Date
- 2013-07-03
- Peptides
- S-adenosylmethionine synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.19 Å
- Oligo State
- homo-tetramer
- Ligands
- 4 x PO4: PHOSPHATE ION(Non-functional Binders)
- 4 x MG: MAGNESIUM ION(Non-covalent)
- 2 x SAM: S-ADENOSYLMETHIONINE(Non-covalent)
- 2 x DPO: DIPHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Wang, F. et al., Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from Sulfolobus solfataricus. Febs J. (2014)
- Release Date
- 2013-07-03
- Peptides
- S-adenosylmethionine synthase: ABCD
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
AD
B