SMTL ID : 4m3q.1 (1 other biounit)

Crystal structure of the catalytic domain of the proto-oncogene tyrosine-protein kinase MER in complex with inhibitor UNC1917

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.72 Å

Oligo State

monomer

Ligands

4 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: W.240, Y.250, P.251, L.268, K.269 Ligand excluded by PLIP CL.2: 4 residues within 4Å: Chain A: R.33, L.36, I.37, L.38 Ligand excluded by PLIP CL.3: 4 residues within 4Å: Chain A: Y.125, Y.131, Y.134, P.141 Ligand excluded by PLIP CL.4: 6 residues within 4Å: Chain A: I.99, R.100, P.121, M.123, R.181, C.187 Ligand excluded by PLIP

1 x MG: MAGNESIUM ION(Non-covalent)

MG.5: 3 residues within 4Å: Chain A: N.177, D.190 Ligands: 24K.6 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:D.190

1 x 24K: trans-4-{[2-(butylamino)-5-(pyridin-2-yl)pyrimidin-4-yl]amino}cyclohexanol(Non-covalent)

24K.6: 20 residues within 4Å: Chain A: L.42, G.43, E.44, G.45, V.50, A.66, K.68, I.99, L.120, P.121, F.122, M.123, K.124, G.126, D.127, R.176, M.179, A.189, D.190 Ligands: MG.5 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.50, A:I.99, A:A.189 Hydrogen bonds: A:P.121, A:M.123

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zhang, W. et al., Pseudo-Cyclization through Intramolecular Hydrogen Bond Enables Discovery of Pyridine Substituted Pyrimidines as New Mer Kinase Inhibitors. J.Med.Chem. (2013)

Release Date

2013-11-27

Peptides

Tyrosine-protein kinase Mer: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tyrosine-protein kinase Mer

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