SMTL ID : 4m5c.1

Crystal Structure of an Truncated Transition metal Transporter

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

monomer

Ligands

1 x CO: COBALT (II) ION(Non-covalent)

CO.1: 5 residues within 4Å: Chain A: M.1, H.2, T.65, H.67, M.113 2 PLIP interactions: 2 interactions with chain A Metal complexes: A:H.2, A:H.67

5 x HEZ: HEXANE-1,6-DIOL(Non-covalent)

HEZ.2: 2 residues within 4Å: Chain A: V.136, L.204 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:V.136, A:L.204 HEZ.3: 2 residues within 4Å: Chain A: P.184, M.187 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:P.184, A:M.187 HEZ.4: 5 residues within 4Å: Chain A: T.12, V.15, M.16, E.157, L.160 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:T.12, A:V.15, A:L.160 HEZ.5: 6 residues within 4Å: Chain A: A.95, L.96, L.97, F.98, G.99, I.103 1 PLIP interactions: 1 interactions with chain A Water bridges: A:I.103 HEZ.6: 6 residues within 4Å: Chain A: G.6, Y.7, Y.174, F.175, P.176, Y.177 2 PLIP interactions: 2 interactions with chain A Hydrophobic interactions: A:Y.7 Hydrogen bonds: A:Y.177

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yu, Y. et al., Planar substrate-binding site dictates the specificity of ECF-type nickel/cobalt transporters. Cell Res. (2014)

Release Date

2014-03-26

Peptides

Cobalamin biosynthesis protein CbiM: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Membrane

We predict this structure to be a membrane protein.
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Cobalamin biosynthesis protein CbiM

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