SMTL ID : 4mg7.1

Crystal structure of hERa-LBD (Y537S) in complex with ferutinine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.15 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 27H: ferutinine(Non-covalent)

27H.1: 14 residues within 4Å: Chain A: L.49, L.52, A.53, E.56, L.87, M.91, L.94, F.107, M.124, I.127, F.128, L.131, G.224, H.227 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.49, A:F.107, A:I.127, A:I.127, A:L.131 Hydrogen bonds: A:E.56, A:E.56 27H.3: 15 residues within 4Å: Chain B: M.46, L.49, T.50, L.52, A.53, E.56, L.87, M.91, L.94, F.107, M.124, I.127, L.131, G.224, H.227 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:T.50, B:F.107, B:F.107, B:I.127, B:L.131 Hydrogen bonds: B:L.52

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: L.23, E.26, W.96 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:W.96 Water bridges: A:G.145 EDO.4: 3 residues within 4Å: Chain B: E.26, W.96, F.148 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.26, B:E.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Delfosse, V. et al., Structural and functional profiling of environmental ligands for estrogen receptors. Environ.Health Perspect. (2014)

Release Date

2014-09-03

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 1: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

Estrogen receptor

Nuclear receptor coactivator 1

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