SMTL ID : 4mg9.1

Crystal structure of hERa-LBD (Y537S) in complex with butylparaben

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-2-2-mer

Ligands

2 x 27K: butyl 4-hydroxybenzoate(Non-covalent)

27K.1: 9 residues within 4Å: Chain A: L.49, A.53, E.56, L.90, L.94, R.97, F.107, G.224, L.228 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:A.53, A:L.90, A:L.94, A:L.94, A:L.228 Hydrogen bonds: A:E.56, A:R.97 Water bridges: A:L.94 pi-Stacking: A:F.107 27K.3: 11 residues within 4Å: Chain B: L.49, A.53, E.56, L.90, M.91, L.94, R.97, F.107, M.124, G.224, H.227 7 PLIP interactions: 7 interactions with chain B Hydrophobic interactions: B:A.53, B:L.90, B:L.94 Hydrogen bonds: B:L.90, B:R.97 Water bridges: B:R.97 pi-Stacking: B:F.107

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 4 residues within 4Å: Chain A: L.23, E.26, W.96, V.149 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:W.96 GOL.4: 3 residues within 4Å: Chain B: E.26, W.96, G.145 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:E.26, B:E.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Delfosse, V. et al., Structural and functional profiling of environmental ligands for estrogen receptors. Environ.Health Perspect. (2014)

Release Date

2014-09-03

Peptides

Estrogen receptor: AB
Nuclear receptor coactivator 1: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
F

D
G

Estrogen receptor

Nuclear receptor coactivator 1

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