SMTL ID : 4mtu.1

beta-Alanyl-CoA:Ammonia Lyase from Clostridium propionicum

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 0.97 Å

Oligo State

homo-hexamer

Ligands

6 x ZN: ZINC ION(Non-covalent)

ZN.1: 3 residues within 4Å: Chain A: D.45, Q.129, H.142 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.45, A:H.142, H2O.3, H2O.4, H2O.4 ZN.3: 3 residues within 4Å: Chain B: D.45, Q.129, H.142 5 PLIP interactions: 2 interactions with chain B, 3 Ligand-Water interactions Metal complexes: B:D.45, B:H.142, H2O.9, H2O.10, H2O.10 ZN.5: 3 residues within 4Å: Chain C: D.45, Q.129, H.142 5 PLIP interactions: 2 interactions with chain C, 3 Ligand-Water interactions Metal complexes: C:D.45, C:H.142, H2O.14, H2O.15, H2O.15 ZN.7: 3 residues within 4Å: Chain D: D.45, Q.129, H.142 5 PLIP interactions: 2 interactions with chain D, 3 Ligand-Water interactions Metal complexes: D:D.45, D:H.142, H2O.20, H2O.21, H2O.21 ZN.9: 3 residues within 4Å: Chain E: D.45, Q.129, H.142 5 PLIP interactions: 2 interactions with chain E, 3 Ligand-Water interactions Metal complexes: E:D.45, E:H.142, H2O.26, H2O.27, H2O.27 ZN.11: 3 residues within 4Å: Chain F: D.45, Q.129, H.142 5 PLIP interactions: 2 interactions with chain F, 3 Ligand-Water interactions Metal complexes: F:D.45, F:H.142, H2O.31, H2O.32, H2O.33

6 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 4 residues within 4Å: Chain A: G.79, N.80, Q.81, S.82 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.80, A:N.80, A:Q.81, A:S.82, A:S.82 SO4.4: 4 residues within 4Å: Chain B: G.79, N.80, Q.81, S.82 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:N.80, B:N.80, B:Q.81, B:S.82, B:S.82 SO4.6: 4 residues within 4Å: Chain C: G.79, N.80, Q.81, S.82 5 PLIP interactions: 5 interactions with chain C Hydrogen bonds: C:N.80, C:N.80, C:Q.81, C:S.82, C:S.82 SO4.8: 4 residues within 4Å: Chain D: G.79, N.80, Q.81, S.82 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:N.80, D:N.80, D:Q.81, D:S.82, D:S.82 SO4.10: 4 residues within 4Å: Chain E: G.79, N.80, Q.81, S.82 5 PLIP interactions: 5 interactions with chain E Hydrogen bonds: E:N.80, E:N.80, E:Q.81, E:S.82, E:S.82 SO4.12: 4 residues within 4Å: Chain F: G.79, N.80, Q.81, S.82 5 PLIP interactions: 5 interactions with chain F Hydrogen bonds: F:N.80, F:N.80, F:Q.81, F:S.82, F:S.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Heine, A. et al., High resolution crystal structure of Clostridium propionicum beta-alanyl-CoA:ammonia lyase, a new member of the "hot dog fold" protein superfamily. Proteins (2014)

Release Date

2014-03-26

Peptides

Beta-alanyl-CoA:ammonia lyase 2: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

D
A

E
A

F
A

Beta-alanyl-CoA:ammonia lyase 2

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