- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.64 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 24 x SO4: SULFATE ION(Non-functional Binders)
SO4.3: 6 residues within 4Å:- Chain A: F.44, E.45, N.46, M.47
- Chain C: R.82, R.130
Ligand excluded by PLIPSO4.4: 7 residues within 4Å:- Chain A: K.69, L.167, E.168, G.169, H.170, N.171, S.174
Ligand excluded by PLIPSO4.5: 7 residues within 4Å:- Chain A: V.84, P.85, R.130, G.131, F.132, E.257, A.260
Ligand excluded by PLIPSO4.6: 4 residues within 4Å:- Chain A: L.109, L.218, N.219, R.224
Ligand excluded by PLIPSO4.7: 2 residues within 4Å:- Chain A: R.82, R.83
Ligand excluded by PLIPSO4.8: 3 residues within 4Å:- Chain A: S.149, T.150, Q.155
Ligand excluded by PLIPSO4.9: 4 residues within 4Å:- Chain A: N.80, Q.160, S.163, I.164
Ligand excluded by PLIPSO4.10: 3 residues within 4Å:- Chain A: R.58, Q.104, H.107
Ligand excluded by PLIPSO4.15: 6 residues within 4Å:- Chain A: R.82, R.130
- Chain B: F.44, E.45, N.46, M.47
Ligand excluded by PLIPSO4.16: 7 residues within 4Å:- Chain B: K.69, L.167, E.168, G.169, H.170, N.171, S.174
Ligand excluded by PLIPSO4.17: 7 residues within 4Å:- Chain B: V.84, P.85, R.130, G.131, F.132, E.257, A.260
Ligand excluded by PLIPSO4.18: 4 residues within 4Å:- Chain B: L.109, L.218, N.219, R.224
Ligand excluded by PLIPSO4.19: 2 residues within 4Å:- Chain B: R.82, R.83
Ligand excluded by PLIPSO4.20: 3 residues within 4Å:- Chain B: S.149, T.150, Q.155
Ligand excluded by PLIPSO4.21: 4 residues within 4Å:- Chain B: N.80, Q.160, S.163, I.164
Ligand excluded by PLIPSO4.22: 3 residues within 4Å:- Chain B: R.58, Q.104, H.107
Ligand excluded by PLIPSO4.27: 6 residues within 4Å:- Chain B: R.82, R.130
- Chain C: F.44, E.45, N.46, M.47
Ligand excluded by PLIPSO4.28: 7 residues within 4Å:- Chain C: K.69, L.167, E.168, G.169, H.170, N.171, S.174
Ligand excluded by PLIPSO4.29: 7 residues within 4Å:- Chain C: V.84, P.85, R.130, G.131, F.132, E.257, A.260
Ligand excluded by PLIPSO4.30: 4 residues within 4Å:- Chain C: L.109, L.218, N.219, R.224
Ligand excluded by PLIPSO4.31: 2 residues within 4Å:- Chain C: R.82, R.83
Ligand excluded by PLIPSO4.32: 3 residues within 4Å:- Chain C: S.149, T.150, Q.155
Ligand excluded by PLIPSO4.33: 4 residues within 4Å:- Chain C: N.80, Q.160, S.163, I.164
Ligand excluded by PLIPSO4.34: 3 residues within 4Å:- Chain C: R.58, Q.104, H.107
Ligand excluded by PLIP- 3 x GOL: GLYCEROL(Non-functional Binders)
GOL.11: 4 residues within 4Å:- Chain A: Q.206, S.222, H.223, R.226
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:S.222, A:R.226
GOL.23: 4 residues within 4Å:- Chain B: Q.206, S.222, H.223, R.226
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:S.222, B:R.226
GOL.35: 4 residues within 4Å:- Chain C: Q.206, S.222, H.223, R.226
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:S.222, C:R.226
- 3 x 2F4: 2-{4-[(6,7-difluoro-1H-benzimidazol-2-yl)amino]phenoxy}-N-methyl-3,4'-bipyridin-2'-amine(Non-covalent)
2F4.12: 16 residues within 4Å:- Chain A: Y.86, H.87, L.197, S.239, V.240, I.254, Y.255, F.258, P.274, M.275, K.280, E.283, V.284, G.287, Q.288, F.291
12 PLIP interactions:12 interactions with chain A- Hydrophobic interactions: A:Y.86, A:V.240, A:I.254, A:F.258, A:V.284, A:F.291, A:F.291
- Hydrogen bonds: A:G.287, A:Q.288
- pi-Stacking: A:F.258, A:F.291
- Halogen bonds: A:E.283
2F4.24: 16 residues within 4Å:- Chain B: Y.86, H.87, L.197, S.239, V.240, I.254, Y.255, F.258, P.274, M.275, K.280, E.283, V.284, G.287, Q.288, F.291
13 PLIP interactions:13 interactions with chain B- Hydrophobic interactions: B:Y.86, B:V.240, B:I.254, B:F.258, B:V.284, B:F.291, B:F.291
- Hydrogen bonds: B:Y.255, B:G.287, B:Q.288
- pi-Stacking: B:F.258, B:F.291
- Halogen bonds: B:E.283
2F4.36: 16 residues within 4Å:- Chain C: Y.86, H.87, L.197, S.239, V.240, I.254, Y.255, F.258, P.274, M.275, K.280, E.283, V.284, G.287, Q.288, F.291
12 PLIP interactions:12 interactions with chain C- Hydrophobic interactions: C:Y.86, C:V.240, C:I.254, C:F.258, C:V.284, C:F.291, C:F.291
- Hydrogen bonds: C:G.287, C:Q.288
- pi-Stacking: C:F.258, C:F.291
- Halogen bonds: C:E.283
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hu, E. et al., Design, Optimization, and Biological Evaluation of Novel Keto-Benzimidazoles as Potent and Selective Inhibitors of Phosphodiesterase 10A (PDE10A). J.Med.Chem. (2013)
- Release Date
- 2013-10-23
- Peptides
- cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.64 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x ZN: ZINC ION(Non-covalent)
- 24 x SO4: SULFATE ION(Non-functional Binders)
- 3 x GOL: GLYCEROL(Non-functional Binders)
- 3 x 2F4: 2-{4-[(6,7-difluoro-1H-benzimidazol-2-yl)amino]phenoxy}-N-methyl-3,4'-bipyridin-2'-amine(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hu, E. et al., Design, Optimization, and Biological Evaluation of Novel Keto-Benzimidazoles as Potent and Selective Inhibitors of Phosphodiesterase 10A (PDE10A). J.Med.Chem. (2013)
- Release Date
- 2013-10-23
- Peptides
- cAMP and cAMP-inhibited cGMP 3',5'-cyclic phosphodiesterase 10A: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A