SMTL ID : 4n1o.1

Structure of Cyclophilin A in complex with Saccharin.

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

5 x LSA: 1,2-BENZISOTHIAZOL-3(2H)-ONE 1,1-DIOXIDE(Non-covalent)

LSA.1: 5 residues within 4Å: Chain A: G.45, F.46, F.67, T.68, K.76 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:F.46, A:F.67, A:T.68, A:K.76 LSA.2: 7 residues within 4Å: Chain A: F.60, M.61, Q.63, A.101, N.102, F.113, H.126 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:F.60, A:F.113 Hydrogen bonds: A:Q.63, A:N.102, A:N.102 pi-Cation interactions: A:H.126, A:H.126 LSA.3: 6 residues within 4Å: Chain A: P.95, V.132, K.133, E.134, G.135, M.136 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:V.132, A:M.136 Hydrogen bonds: A:G.135, A:M.136 Water bridges: A:N.137, A:N.137, A:N.137 LSA.4: 5 residues within 4Å: Chain A: P.30, K.31, E.34, Y.79 Ligands: LSA.5 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:E.34, A:E.34 Water bridges: A:E.34 LSA.5: 3 residues within 4Å: Chain A: P.30, K.31 Ligands: LSA.4 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mcnae, I.W. et al., Mapping the binding surface of Cyclophilin A. To be Published

Release Date

2015-08-12

Peptides

Peptidyl-prolyl cis-trans isomerase A: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Peptidyl-prolyl cis-trans isomerase A

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