SMTL ID : 4n4t.1 (1 other biounit)

Co-crystal structure of tankyrase 1 with compound 3 [(4S)-3-{4-[6-amino-5-(pyrimidin-2-yl)pyridin-3-yl]phenyl}-5,5-dimethyl-4-phenyl-1,3-oxazolidin-2-one]

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.32 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.131, H.134, C.139, C.142 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.131, A:H.134, A:C.139, A:C.142

1 x 2GV: (4S)-3-{4-[6-amino-5-(pyrimidin-2-yl)pyridin-3-yl]phenyl}-5,5-dimethyl-4-phenyl-1,3-oxazolidin-2-one(Non-covalent)

2GV.2: 15 residues within 4Å: Chain A: H.81, S.83, P.84, F.85, A.88, I.89, G.93, F.94, D.95, H.98, F.105, G.108, I.109, Y.110, I.125 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:F.85, A:F.85, A:I.89, A:H.98, A:F.105, A:Y.110, A:I.125 Hydrogen bonds: A:G.93, A:D.95, A:Y.110 pi-Stacking: A:F.85, A:H.98

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Huang, H. et al., Structure-based design of 2-aminopyridine oxazolidinones as potent and selective tankyrase inhibitors. ACS Med Chem Lett (2013)

Release Date

2013-12-11

Peptides

Tankyrase-1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Tankyrase-1

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