SMTL ID : 4n57.1 (1 other biounit)

Crystal structure of aminoglycoside phosphotransferase APH(2'')-IVa ADP complex

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.35 Å

Oligo State

monomer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 3 residues within 4Å: Chain A: H.222, D.237 Ligands: ADP.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:H.222, A:D.237, H2O.3, H2O.4 MG.2: 3 residues within 4Å: Chain A: D.237, D.240 Ligands: ADP.3 4 PLIP interactions: 2 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:D.237, A:D.237, H2O.3, H2O.3

1 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)

ADP.3: 17 residues within 4Å: Chain A: S.48, G.51, N.52, D.53, C.54, A.56, I.64, K.66, P.96, T.116, K.117, I.118, H.222, I.236, D.237 Ligands: MG.1, MG.2 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:N.52, A:N.52, A:D.53, A:C.54, A:T.116, A:I.118, A:D.237 Salt bridges: A:K.66, A:K.66

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kaplan, E. et al., Crystal structure of aminoglycoside phosphotransferase APH(2'')-IVa ADP complex. To be Published

Release Date

2014-12-17

Peptides

APH(2'')-Id: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

APH(2'')-Id

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