SMTL ID : 4nce.1

Influenza polymerase basic protein 2 (PB2) bound to 7-methyl-GTP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

1 x MGT: 7N-METHYL-8-HYDROGUANOSINE-5'-TRIPHOSPHATE(Non-covalent)

MGT.1: 14 residues within 4Å: Chain A: F.9, S.10, R.18, S.23, R.41, H.43, E.47, F.49, K.62, F.90, Q.92, N.115, M.117, H.118 13 PLIP interactions: 13 interactions with chain A Hydrogen bonds: A:R.18, A:S.23, A:S.23, A:N.115, A:N.115 Water bridges: A:H.43, A:K.62 Salt bridges: A:R.41, A:R.41, A:E.47, A:H.118 pi-Stacking: A:H.43 pi-Cation interactions: A:H.43

2 x 11H: 9,10-dioxo-9,10-dihydroanthracene-2,6-disulfonic acid(Non-covalent)

11H.2: 7 residues within 4Å: Chain A: Q.36, T.37, L.38, K.39, F.106, V.107, P.116 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:V.107 Hydrogen bonds: A:Q.36, A:K.39 Salt bridges: A:K.39 pi-Stacking: A:F.106 11H.3: 4 residues within 4Å: Chain A: M.144, G.145, S.167, M.169 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.167

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Clark, M.P. et al., Discovery of a Novel, First-in-Class, Orally Bioavailable Azaindole Inhibitor (VX-787) of Influenza PB2. J.Med.Chem. (2014)

Release Date

2014-07-30

Peptides

Polymerase basic protein 2: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Polymerase basic protein 2

Related Entries With Identical Sequence