SMTL ID : 4nge.2 (1 other biounit)

Crystal Structure of Human Presequence Protease in Complex with Amyloid-beta (1-40)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

hetero-oligomer

Ligands

1 x UNK: Beta-amyloid protein 40(Non-functional Binders)

UNK.1: 7 residues within 4Å: Chain A: Y.120, G.359, S.426, Y.427, I.428, S.430, C.431 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.359, A:S.430, A:S.430, A:C.431

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 1 residues within 4Å: Chain A: D.712 No protein-ligand interaction detected (PLIP) GOL.3: 3 residues within 4Å: Chain A: D.386, D.390, K.471 No protein-ligand interaction detected (PLIP)

1 x ZN: ZINC ION(Non-covalent)

ZN.4: 5 residues within 4Å: Chain A: H.81, H.85, E.182 Chain B: F.20, A.21 5 PLIP interactions: 4 interactions with chain A, 1 interactions with chain B Metal complexes: A:H.81, A:H.85, A:E.182, A:E.182, B:F.20

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

King, J.V. et al., Molecular basis of substrate recognition and degradation by human presequence protease. Structure (2014)

Release Date

2014-05-14

Peptides

Presequence protease, mitochondrial: A
Beta-amyloid protein 40: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
D

B
E

Presequence protease, mitochondrial

Beta-amyloid protein 40

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