SMTL ID : 4nr1.1

Factor inhibiting HIF-1 alpha in complex with consensus ankyrin repeat domain-(d)allyl-GLY peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.68 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.202, D.204, H.282 Chain B: X.16 Ligands: OGA.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.202, A:D.204, A:H.282

1 x OGA: N-OXALYLGLYCINE(Non-covalent)

OGA.2: 14 residues within 4Å: Chain A: Y.148, L.191, T.199, H.202, D.204, N.208, F.210, K.217, H.282, I.284, N.297, W.299 Chain B: X.16 Ligands: ZN.1 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:T.199, A:T.199, A:N.208, A:N.297 Salt bridges: A:K.217, A:H.282

3 x SO4: SULFATE ION(Non-functional Binders)

SO4.3: 4 residues within 4Å: Chain A: R.141, G.143, E.144, E.145 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:E.144, A:E.145 Salt bridges: A:R.141 SO4.4: 3 residues within 4Å: Chain A: D.225, K.314, A.315 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:A.315 SO4.5: 3 residues within 4Å: Chain A: R.36, H.101, R.146 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.101 Salt bridges: A:R.36, A:H.101, A:R.146

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scotti, J.S., Structure of an oxygenase in complex with substrate. To be Published

Release Date

2015-01-21

Peptides

Hypoxia-inducible factor 1-alpha inhibitor: A
CONSENSUS ANKYRIN REPEAT DOMAIN-(D)allyl glycine: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
S

Hypoxia-inducible factor 1-alpha inhibitor

CONSENSUS ANKYRIN REPEAT DOMAIN-(D)allyl glycine

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