SMTL ID : 4o4t.1

MURINE NEUROGLOBIN UNDER XENON PRESSURE 30 bar

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

1 x HEM: PROTOPORPHYRIN IX CONTAINING FE(Non-covalent)

HEM.1: 15 residues within 4Å: Chain A: L.44, F.45, Y.47, H.67, K.70, V.71, V.74, Y.91, L.95, K.98, H.99, V.104, F.109, V.112 Ligands: XE.6 26 PLIP interactions: 26 interactions with chain A, Hydrophobic interactions: A:L.44, A:F.45, A:F.45, A:F.45, A:Y.47, A:K.70, A:K.70, A:V.71, A:V.74, A:V.74, A:V.74, A:L.95, A:V.104, A:V.104, A:F.109, A:F.109, A:V.112, A:V.112 Hydrogen bonds: A:Y.47 Water bridges: A:K.70, A:K.70 Salt bridges: A:H.67, A:K.70, A:K.98 Metal complexes: A:H.67, A:H.99

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 6 residues within 4Å: Chain A: R.21, S.22, P.23, L.24, E.25, R.69 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:L.24, A:E.25, A:E.25, A:E.25 Salt bridges: A:R.69

7 x XE: XENON(Non-covalent)(Non-functional Binders)

XE.3: 1 residues within 4Å: Chain A: K.70 No protein-ligand interaction detected (PLIP) XE.4: 6 residues within 4Å: Chain A: F.31, A.32, F.35, S.58, L.59 Ligands: XE.7 No protein-ligand interaction detected (PLIP) XE.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP) XE.6: 4 residues within 4Å: Chain A: I.75, V.112, Y.140 Ligands: HEM.1 No protein-ligand interaction detected (PLIP) XE.7: 2 residues within 4Å: Chain A: L.59 Ligands: XE.4 No protein-ligand interaction detected (PLIP) XE.8: 1 residues within 4Å: Chain A: M.72 No protein-ligand interaction detected (PLIP) XE.9: 1 residues within 4Å: Chain A: R.69 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Abraini, J.H. et al., Crystallographic Studies with Xenon and Nitrous Oxide Provide Evidence for Protein-dependent Processes in the Mechanisms of General Anesthesia. Anesthesiology (2014)

Release Date

2014-09-24

Peptides

Neuroglobin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Neuroglobin

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