SMTL ID : 4ok7.2 (3 other biounits)

Structure of bacteriophage SPN1S endolysin from Salmonella typhimurium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

4 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: N.76, Y.77, S.78, G.81, R.101 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:N.76, A:S.78 Salt bridges: A:R.101 SO4.2: 2 residues within 4Å: Chain A: Q.170, D.171 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:D.171 Water bridges: A:R.34, A:A.169, A:E.172 SO4.3: 1 residues within 4Å: Chain A: K.158 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.158 SO4.4: 1 residues within 4Å: Chain A: K.189 1 PLIP interactions: 1 interactions with chain A Salt bridges: A:K.189

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 3 residues within 4Å: Chain A: Q.12, G.13, H.14 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:H.14, A:H.14 Water bridges: A:N.8, A:Q.12 GOL.6: 2 residues within 4Å: Chain A: S.4, S.5 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:S.5

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, Y. et al., Structure of bacteriophage SPN1S endolysin reveals an unusual two-module fold for the peptidoglycan lytic and binding activity. Mol.Microbiol. (2014)

Release Date

2014-03-19

Peptides

Endolysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Endolysin

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