SMTL ID : 4ok7.4 (3 other biounits)

Structure of bacteriophage SPN1S endolysin from Salmonella typhimurium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.90 Å

Oligo State

monomer

Ligands

5 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: F.85, A.88, R.90, Y.121, R.124 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:R.90, A:R.124 SO4.2: 3 residues within 4Å: Chain A: H.3, S.5, G.6 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:G.6 Salt bridges: A:H.3 SO4.3: 5 residues within 4Å: Chain A: N.76, Y.77, S.78, G.81, R.101 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:S.78, A:S.78 Salt bridges: A:R.101 SO4.4: 4 residues within 4Å: Chain A: D.193, L.194, V.195, R.196 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:D.193, A:D.193, A:V.195, A:R.196 Salt bridges: A:R.196 SO4.5: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Park, Y. et al., Structure of bacteriophage SPN1S endolysin reveals an unusual two-module fold for the peptidoglycan lytic and binding activity. Mol.Microbiol. (2014)

Release Date

2014-03-19

Peptides

Endolysin: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Endolysin

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