SMTL ID : 4oni.2 (1 other biounit)

Structure of Human Orphan Receptor LRH1 bound to two bacterial phospholipids

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

hetero-1-1-mer

Ligands

1 x P6L: (2S)-3-{[{[(2S)-2,3-DIHYDROXYPROPYL]OXY}(HYDROXY)PHOSPHORYL]OXY}-2-[(6E)-HEXADEC-6-ENOYLOXY]PROPYL (8E)-OCTADEC-8-ENOATE(Non-covalent)

P6L.1: 22 residues within 4Å: Chain A: T.53, F.54, M.57, A.61, W.94, S.95, L.98, I.99, H.102, V.123, I.127, I.128, Q.131, A.132, G.133, L.136, L.139, M.140, A.143, A.225, Y.228, K.232 15 PLIP interactions: 15 interactions with chain A Hydrophobic interactions: A:A.61, A:W.94, A:L.98, A:I.99, A:H.102, A:V.123, A:I.127, A:L.136, A:L.139, A:A.143, A:A.225 Hydrogen bonds: A:G.133, A:Y.228, A:Y.228 Salt bridges: A:K.232

1 x PG4: TETRAETHYLENE GLYCOL(Non-functional Binders)

PG4.2: 5 residues within 4Å: Chain A: M.35, L.38, Q.39, M.57, Q.131 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:L.38, A:Q.131

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gorman, M.A. et al., Human nuclear receptor LRH1 bound to phosopholipids and SHP peptide. To be Published

Release Date

2015-02-11

Peptides

Nuclear receptor subfamily 5 group A member 2: A
Nuclear receptor subfamily 0 group B member 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

Nuclear receptor subfamily 5 group A member 2

Nuclear receptor subfamily 0 group B member 2

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