SMTL ID : 4onm.1

Crystal structure of human Mms2/Ubc13 - NSC697923

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.35 Å

Oligo State

hetero-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: M.96, N.97, G.98, I.99, N.100, N.101 6 PLIP interactions: 6 interactions with chain A Hydrogen bonds: A:G.98, A:N.101 Water bridges: A:N.97, A:N.100, A:N.100, A:S.102

1 x N2F: 2-[(4-methylphenyl)sulfonyl]-5-nitrofuran(Covalent)

N2F.2: 10 residues within 4Å: Chain B: P.86, N.87, V.88, D.89, R.93, I.94, C.95, L.129, A.130, N.131 1 PLIP interactions: 1 interactions with chain B Water bridges: B:C.95

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hodge, C.D. et al., Covalent Inhibition of Ubc13 Affects Ubiquitin Signaling and Reveals Active Site Elements Important for Targeting. Acs Chem.Biol. (2015)

Release Date

2015-05-06

Peptides

Ubiquitin-conjugating enzyme E2 variant 2: A
Ubiquitin-conjugating enzyme E2 N: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Ubiquitin-conjugating enzyme E2 variant 2

Ubiquitin-conjugating enzyme E2 N

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