SMTL ID : 4orh.1 (2 other biounits)

Crystal structure of RNF8 bound to the UBC13/MMS2 heterodimer

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.80 Å

Oligo State

hetero-1-1-2-mer

Ligands

4 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain C: C.82, H.84, C.101, C.104 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.82, C:H.84, C:C.101, C:C.104 ZN.2: 5 residues within 4Å: Chain C: C.67, C.70, C.87, C.90, R.143 4 PLIP interactions: 4 interactions with chain C Metal complexes: C:C.67, C:C.70, C:C.87, C:C.90 ZN.3: 4 residues within 4Å: Chain D: C.82, H.84, C.101, C.104 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.82, D:H.84, D:C.101, D:C.104 ZN.4: 5 residues within 4Å: Chain D: C.67, C.70, C.87, C.90, R.143 4 PLIP interactions: 4 interactions with chain D Metal complexes: D:C.67, D:C.70, D:C.87, D:C.90

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Campbell, S.J. et al., Molecular insights into the function of RING finger (RNF)-containing proteins hRNF8 and hRNF168 in Ubc13/Mms2-dependent ubiquitylation. J.Biol.Chem. (2012)

Release Date

2014-02-26

Peptides

Ubiquitin-conjugating enzyme E2 variant 2: A
Ubiquitin-conjugating enzyme E2 N: B
E3 ubiquitin-protein ligase RNF8: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
I

B
J

C
K

D
L

Ubiquitin-conjugating enzyme E2 variant 2

Ubiquitin-conjugating enzyme E2 N

E3 ubiquitin-protein ligase RNF8

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