SMTL ID : 4ooj.2 (1 other biounit)

Crystal structure of the N-terminal domain of the Legionella pneumophila protein SidC at 2.4A resolution

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.40 Å

Oligo State

homo-dimer

Ligands

2 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 1 residues within 4Å: Chain A: D.170 No protein-ligand interaction detected (PLIP) MG.4: 1 residues within 4Å: Chain B: D.170 No protein-ligand interaction detected (PLIP)

7 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.2: 6 residues within 4Å: Chain A: R.163, N.169, K.171, T.173, R.184, N.185 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:R.184, A:N.185 Water bridges: A:R.163, A:S.187 PEG.3: 3 residues within 4Å: Chain A: K.522, E.558, I.607 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:K.522, A:S.556, A:S.556 Water bridges: A:E.558 PEG.5: 5 residues within 4Å: Chain B: N.90, K.93, D.101, L.104, K.105 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:D.101, B:D.101, B:K.105 PEG.6: 2 residues within 4Å: Chain B: S.91, K.94 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:S.91 PEG.7: 0 residues within 4Å: (No contacts) 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.163 PEG.8: 7 residues within 4Å: Chain A: C.48, V.52, I.55 Chain B: P.285, R.286, L.299, A.318 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:R.286 PEG.9: 6 residues within 4Å: Chain B: G.247, E.248, K.249, K.250, D.251, E.252 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:E.248, B:K.249, B:K.250, B:D.251, B:E.252

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Gazdag, E.M. et al., The structure of the N-terminal domain of the Legionella protein SidC. J.Struct.Biol. (2014)

Release Date

2014-02-26

Peptides

SidC, interaptin: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

B
D

SidC, interaptin

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