SMTL ID : 4oyo.2 (1 other biounit)

Human solAC Complexed with 4-(2-Chlorophenyl)-3-methyl-1H-pyrazole

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

homo-trimer

Ligands

9 x 1WC: 4-(2-chlorophenyl)-5-methyl-1H-pyrazole(Non-covalent)

1WC.1: 12 residues within 4Å: Chain A: F.46, D.48, A.98, G.99, D.100, A.101, R.177, Q.180, F.337, F.339 Ligands: 1WC.2, 1WC.3 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.46, A:F.337, A:F.339 Hydrogen bonds: A:D.48, A:D.100 Halogen bonds: A:A.98 1WC.2: 14 residues within 4Å: Chain A: F.46, L.95, K.96, A.98, L.103, F.166, L.167, V.168, V.173, V.336, F.337, M.338, F.339 Ligands: 1WC.1 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.46, A:K.96, A:K.96, A:L.103, A:L.103, A:F.337, A:F.339 Hydrogen bonds: A:V.168, A:M.338, A:M.338 pi-Stacking: A:F.339 1WC.3: 14 residues within 4Å: Chain A: T.53, G.99, D.100, F.297, F.337, L.346, V.407, I.408, G.409, V.412, N.413, A.416, R.417 Ligands: 1WC.1 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:F.297, A:F.337, A:A.416 Hydrogen bonds: A:T.53, A:T.53, A:G.409 1WC.6: 12 residues within 4Å: Chain B: F.46, D.48, A.98, G.99, D.100, A.101, R.177, Q.180, F.337, F.339 Ligands: 1WC.7, 1WC.8 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:F.46, B:F.337, B:F.339 Hydrogen bonds: B:D.48, B:D.100 Halogen bonds: B:A.98 1WC.7: 14 residues within 4Å: Chain B: F.46, L.95, K.96, A.98, L.103, F.166, L.167, V.168, V.173, V.336, F.337, M.338, F.339 Ligands: 1WC.6 11 PLIP interactions: 11 interactions with chain B Hydrophobic interactions: B:F.46, B:K.96, B:K.96, B:L.103, B:L.103, B:F.337, B:F.339 Hydrogen bonds: B:V.168, B:M.338, B:M.338 pi-Stacking: B:F.339 1WC.8: 14 residues within 4Å: Chain B: T.53, G.99, D.100, F.297, F.337, L.346, V.407, I.408, G.409, V.412, N.413, A.416, R.417 Ligands: 1WC.6 6 PLIP interactions: 6 interactions with chain B Hydrophobic interactions: B:F.297, B:F.337, B:A.416 Hydrogen bonds: B:T.53, B:T.53, B:G.409 1WC.11: 12 residues within 4Å: Chain C: F.46, D.48, A.98, G.99, D.100, A.101, R.177, Q.180, F.337, F.339 Ligands: 1WC.12, 1WC.13 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:F.46, C:F.337, C:F.339 Hydrogen bonds: C:D.48, C:D.100 Halogen bonds: C:A.98 1WC.12: 14 residues within 4Å: Chain C: F.46, L.95, K.96, A.98, L.103, F.166, L.167, V.168, V.173, V.336, F.337, M.338, F.339 Ligands: 1WC.11 11 PLIP interactions: 11 interactions with chain C Hydrophobic interactions: C:F.46, C:K.96, C:K.96, C:L.103, C:L.103, C:F.337, C:F.339 Hydrogen bonds: C:V.168, C:M.338, C:M.338 pi-Stacking: C:F.339 1WC.13: 14 residues within 4Å: Chain C: T.53, G.99, D.100, F.297, F.337, L.346, V.407, I.408, G.409, V.412, N.413, A.416, R.417 Ligands: 1WC.11 6 PLIP interactions: 6 interactions with chain C Hydrophobic interactions: C:F.297, C:F.337, C:A.416 Hydrogen bonds: C:T.53, C:T.53, C:G.409

6 x GOL: GLYCEROL(Non-functional Binders)

GOL.4: 7 residues within 4Å: Chain A: H.163, T.323, L.326, K.327, G.331, Q.332, I.333 8 PLIP interactions: 8 interactions with chain A Hydrogen bonds: A:H.163, A:Q.332, A:I.333, A:I.333 Water bridges: A:T.323, A:T.323, A:T.323, A:T.323 GOL.5: 8 residues within 4Å: Chain A: I.25, G.28, H.29, F.30, L.262, S.265, L.266, Y.269 9 PLIP interactions: 9 interactions with chain A Hydrogen bonds: A:F.30, A:F.30, A:S.265, A:Y.269 Water bridges: A:I.25, A:V.26, A:R.34, A:R.34, A:S.265 GOL.9: 7 residues within 4Å: Chain B: H.163, T.323, L.326, K.327, G.331, Q.332, I.333 8 PLIP interactions: 8 interactions with chain B Hydrogen bonds: B:H.163, B:Q.332, B:I.333, B:I.333 Water bridges: B:T.323, B:T.323, B:T.323, B:T.323 GOL.10: 8 residues within 4Å: Chain B: I.25, G.28, H.29, F.30, L.262, S.265, L.266, Y.269 9 PLIP interactions: 9 interactions with chain B Hydrogen bonds: B:F.30, B:F.30, B:S.265, B:Y.269 Water bridges: B:I.25, B:V.26, B:R.34, B:R.34, B:S.265 GOL.14: 7 residues within 4Å: Chain C: H.163, T.323, L.326, K.327, G.331, Q.332, I.333 8 PLIP interactions: 8 interactions with chain C Hydrogen bonds: C:H.163, C:Q.332, C:I.333, C:I.333 Water bridges: C:T.323, C:T.323, C:T.323, C:T.323 GOL.15: 8 residues within 4Å: Chain C: I.25, G.28, H.29, F.30, L.262, S.265, L.266, Y.269 9 PLIP interactions: 9 interactions with chain C Hydrogen bonds: C:F.30, C:F.30, C:S.265, C:Y.269 Water bridges: C:I.25, C:V.26, C:R.34, C:R.34, C:S.265

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saalau-Bethell, S.M. et al., Crystal structure of human soluble adenylate cyclase reveals a distinct, highly flexible allosteric bicarbonate binding pocket. Chemmedchem (2014)

Release Date

2014-04-02

Peptides

Adenylate cyclase type 10: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Adenylate cyclase type 10

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