SMTL ID : 4oyx.2 (1 other biounit)

Human solAC Complexed with AMPCPP

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.89 Å

Oligo State

homo-trimer

Ligands

3 x APC: DIPHOSPHOMETHYLPHOSPHONIC ACID ADENOSYL ESTER(Non-covalent)

APC.1: 23 residues within 4Å: Chain A: D.48, I.49, S.50, G.51, F.52, T.53, A.98, G.99, D.100, R.177, F.297, F.337, F.339, L.346, T.406, V.407, V.412, N.413, A.416, R.417, K.452, G.453 Ligands: CA.2 18 PLIP interactions: 18 interactions with chain A Hydrogen bonds: A:D.48, A:G.51, A:F.52, A:T.53, A:T.53, A:D.100, A:R.177, A:V.407, A:N.413, A:R.417, A:R.417 Water bridges: A:T.53, A:T.53, A:A.54, A:A.54, A:G.99, A:G.99, A:D.100 APC.4: 23 residues within 4Å: Chain B: D.48, I.49, S.50, G.51, F.52, T.53, A.98, G.99, D.100, R.177, F.297, F.337, F.339, L.346, T.406, V.407, V.412, N.413, A.416, R.417, K.452, G.453 Ligands: CA.5 18 PLIP interactions: 18 interactions with chain B Hydrogen bonds: B:D.48, B:G.51, B:F.52, B:T.53, B:T.53, B:D.100, B:R.177, B:V.407, B:N.413, B:R.417, B:R.417 Water bridges: B:T.53, B:T.53, B:A.54, B:A.54, B:G.99, B:G.99, B:D.100 APC.7: 23 residues within 4Å: Chain C: D.48, I.49, S.50, G.51, F.52, T.53, A.98, G.99, D.100, R.177, F.297, F.337, F.339, L.346, T.406, V.407, V.412, N.413, A.416, R.417, K.452, G.453 Ligands: CA.8 18 PLIP interactions: 18 interactions with chain C Hydrogen bonds: C:D.48, C:G.51, C:F.52, C:T.53, C:T.53, C:D.100, C:R.177, C:V.407, C:N.413, C:R.417, C:R.417 Water bridges: C:T.53, C:T.53, C:A.54, C:A.54, C:G.99, C:G.99, C:D.100

3 x CA: CALCIUM ION(Non-covalent)

CA.2: 5 residues within 4Å: Chain A: D.48, I.49, D.100, A.101 Ligands: APC.1 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.48, A:I.49, A:D.100, H2O.10 CA.5: 5 residues within 4Å: Chain B: D.48, I.49, D.100, A.101 Ligands: APC.4 4 PLIP interactions: 3 interactions with chain B, 1 Ligand-Water interactions Metal complexes: B:D.48, B:I.49, B:D.100, H2O.27 CA.8: 5 residues within 4Å: Chain C: D.48, I.49, D.100, A.101 Ligands: APC.7 4 PLIP interactions: 3 interactions with chain C, 1 Ligand-Water interactions Metal complexes: C:D.48, C:I.49, C:D.100, H2O.43

3 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 3 residues within 4Å: Chain A: K.96, L.167, V.168 Ligand excluded by PLIP CL.6: 3 residues within 4Å: Chain B: K.96, L.167, V.168 Ligand excluded by PLIP CL.9: 3 residues within 4Å: Chain C: K.96, L.167, V.168 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Saalau-Bethell, S.M. et al., Crystal structure of human soluble adenylate cyclase reveals a distinct, highly flexible allosteric bicarbonate binding pocket. Chemmedchem (2014)

Release Date

2014-04-02

Peptides

Adenylate cyclase type 10: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

Adenylate cyclase type 10

Related Entries With Identical Sequence