SMTL ID : 4pid.1

Crystal structure of human adenovirus 2 protease with a weak pyrimidine nitrile inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.59 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.1: 6 residues within 4Å: Chain A: P.145, T.146, L.149, F.177, R.180, H.181 3 PLIP interactions: 3 interactions with chain A Hydrophobic interactions: A:L.149 Salt bridges: A:R.180, A:H.181

1 x 2UQ: N-benzyl-2-[(Z)-iminomethyl]pyrimidine-5-carboxamide(Covalent)

2UQ.2: 8 residues within 4Å: Chain A: G.52, V.53, Q.115, S.119, A.120, A.121, C.122, L.201 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:G.52, A:Q.115, A:S.119, A:C.122

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Mac Sweeney, A. et al., Discovery and structure-based optimization of adenain inhibitors. Acs Med.Chem.Lett. (2014)

Release Date

2014-09-10

Peptides

Protease: A
Pre-protein VI: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protease

Pre-protein VI

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