SMTL ID : 4prg.1

0072 PARTIAL AGONIST PPAR GAMMA COCRYSTAL

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.90 Å

Oligo State

homo-tetramer

Ligands

4 x 072: (+/-)(2S,5S)-3-(4-(4-CARBOXYPHENYL)BUTYL)-2-HEPTYL-4-OXO-5-THIAZOLIDINE(Non-covalent)

072.1: 24 residues within 4Å: Chain A: L.49, E.53, F.58, H.60, I.61, A.72, R.74, I.75, F.76, C.79, R.82, I.120, Y.121, M.123, L.124, L.127, L.134, I.135, S.136, M.142, L.150, F.154, F.157, M.158 20 PLIP interactions: 20 interactions with chain A Hydrophobic interactions: A:L.49, A:F.58, A:F.58, A:H.60, A:A.72, A:I.75, A:I.75, A:I.75, A:F.76, A:I.120, A:Y.121, A:L.124, A:L.127, A:L.150, A:F.154, A:F.154, A:F.157 Hydrogen bonds: A:S.136 Salt bridges: A:R.74 pi-Stacking: A:F.58 072.2: 24 residues within 4Å: Chain B: E.53, F.58, I.61, T.62, A.72, R.74, I.75, F.76, C.79, R.82, S.83, A.86, I.120, Y.121, M.123, L.124, L.127, L.134, I.135, S.136, L.150, F.154, F.157, M.158 18 PLIP interactions: 18 interactions with chain B Hydrophobic interactions: B:I.75, B:F.76, B:F.76, B:A.86, B:Y.121, B:L.124, B:L.127, B:I.135, B:L.150, B:F.154, B:F.157, B:F.157, B:F.157 Hydrogen bonds: B:E.53, B:R.82, B:S.136 Salt bridges: B:R.74 pi-Stacking: B:F.58 072.3: 23 residues within 4Å: Chain C: E.53, F.58, H.60, I.61, A.72, R.74, I.75, G.78, C.79, R.82, A.86, I.120, Y.121, M.123, L.124, L.127, I.135, S.136, M.142, L.147, L.150, F.154, M.158 19 PLIP interactions: 19 interactions with chain C Hydrophobic interactions: C:F.58, C:H.60, C:A.72, C:I.75, C:I.75, C:R.82, C:A.86, C:I.120, C:Y.121, C:M.123, C:L.124, C:I.135, C:L.147, C:L.150, C:F.154 Hydrogen bonds: C:R.82, C:S.136 Salt bridges: C:R.74 pi-Stacking: C:F.58 072.4: 30 residues within 4Å: Chain D: E.53, I.61, T.62, P.63, A.72, R.74, I.75, F.76, G.78, C.79, R.82, S.83, A.86, E.89, I.120, Y.121, M.123, L.124, L.127, V.133, L.134, I.135, S.136, M.142, L.147, L.150, F.154, F.157, M.158, H.243 18 PLIP interactions: 18 interactions with chain D Hydrophobic interactions: D:E.53, D:I.75, D:F.76, D:A.86, D:I.120, D:Y.121, D:L.124, D:L.124, D:L.127, D:I.135, D:I.135, D:L.147, D:L.150, D:F.154, D:F.157 Hydrogen bonds: D:R.82, D:S.136 Salt bridges: D:R.74

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Oberfield, J.L. et al., A peroxisome proliferator-activated receptor gamma ligand inhibits adipocyte differentiation. Proc.Natl.Acad.Sci.USA (1999)

Release Date

1999-05-27

Peptides

PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA): ABCD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

PROTEIN (PEROXISOME PROLIFERATOR ACTIVATED RECEPTOR GAMMA)

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