- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.11 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 3 x X7A: [(5R)-5-amino-5-carboxy-7-(piperidin-1-yl)heptyl](trihydroxy)borate(1-)(Non-covalent)
X7A.3: 17 residues within 4Å:- Chain A: H.152, D.175, H.177, D.179, N.181, S.188, H.192, G.193, D.232, D.234, E.237, D.283, D.285, T.297, E.328
- Ligands: MN.1, MN.2
15 PLIP interactions:15 interactions with chain A- Hydrophobic interactions: A:H.177
- Hydrogen bonds: A:N.181, A:S.188, A:H.192, A:D.234, A:D.234, A:E.328
- Water bridges: A:S.188, A:N.190, A:G.193, A:G.193, A:D.234, A:T.297
- Salt bridges: A:D.232, A:D.234
X7A.9: 17 residues within 4Å:- Chain B: H.152, D.175, H.177, D.179, N.181, S.188, H.192, G.193, D.232, D.234, E.237, D.283, D.285, T.297, E.328
- Ligands: MN.7, MN.8
16 PLIP interactions:16 interactions with chain B- Hydrophobic interactions: B:H.177
- Hydrogen bonds: B:N.181, B:S.188, B:H.192, B:D.234, B:D.234, B:T.297, B:E.328
- Water bridges: B:S.188, B:N.190, B:G.193, B:G.193, B:D.234, B:T.297
- Salt bridges: B:D.232, B:D.234
X7A.15: 17 residues within 4Å:- Chain C: H.152, D.175, H.177, D.179, N.181, S.188, H.192, G.193, D.232, D.234, E.237, D.283, D.285, T.297, E.328
- Ligands: MN.13, MN.14
16 PLIP interactions:16 interactions with chain C- Hydrophobic interactions: C:H.177
- Hydrogen bonds: C:N.181, C:S.188, C:H.192, C:D.234, C:D.234, C:T.297, C:E.328
- Water bridges: C:S.188, C:N.190, C:G.193, C:G.193, C:D.234, C:T.297
- Salt bridges: C:D.232, C:D.234
- 9 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 7 residues within 4Å:- Chain A: E.97, D.100, P.101, Q.102, M.106, K.107, W.108
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.100, A:M.106, A:W.108
- Water bridges: A:R.103
GOL.5: 4 residues within 4Å:- Chain A: N.53, I.59, Y.62, E.94
1 PLIP interactions:1 interactions with chain A- Water bridges: A:R.54
GOL.6: 2 residues within 4Å:- Chain A: Y.248, D.253
3 PLIP interactions:1 interactions with chain B, 2 interactions with chain A- Water bridges: B:S.359, A:R.256
- Hydrogen bonds: A:Y.248
GOL.10: 7 residues within 4Å:- Chain B: E.97, D.100, P.101, Q.102, M.106, K.107, W.108
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:D.100, B:M.106, B:W.108
- Water bridges: B:R.103
GOL.11: 4 residues within 4Å:- Chain B: N.53, I.59, Y.62, E.94
1 PLIP interactions:1 interactions with chain B- Water bridges: B:R.54
GOL.12: 2 residues within 4Å:- Chain B: Y.248, D.253
3 PLIP interactions:2 interactions with chain B, 1 interactions with chain C- Hydrogen bonds: B:Y.248
- Water bridges: B:R.256, C:S.359
GOL.16: 7 residues within 4Å:- Chain C: E.97, D.100, P.101, Q.102, M.106, K.107, W.108
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:D.100, C:M.106, C:W.108
- Water bridges: C:R.103
GOL.17: 4 residues within 4Å:- Chain C: N.53, I.59, Y.62, E.94
1 PLIP interactions:1 interactions with chain C- Water bridges: C:R.54
GOL.18: 2 residues within 4Å:- Chain C: Y.248, D.253
3 PLIP interactions:1 interactions with chain A, 2 interactions with chain C- Water bridges: A:S.359, C:R.256
- Hydrogen bonds: C:Y.248
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hai, Y. et al., Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis. Biochemistry (2014)
- Release Date
- 2014-07-16
- Peptides
- Arginase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 2.11 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 3 x X7A: [(5R)-5-amino-5-carboxy-7-(piperidin-1-yl)heptyl](trihydroxy)borate(1-)(Non-covalent)
- 9 x GOL: GLYCEROL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hai, Y. et al., Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis. Biochemistry (2014)
- Release Date
- 2014-07-16
- Peptides
- Arginase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B