- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.83 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 3 x VAL: VALINE(Non-covalent)
VAL.3: 8 residues within 4Å:- Chain A: H.177, D.179, N.181, S.188, H.192, G.193, D.234, T.297
10 PLIP interactions:9 interactions with chain A, 1 Ligand-Ligand interactions- Hydrophobic interactions: A:T.297
- Hydrogen bonds: A:N.181, A:S.188, A:D.234, A:D.234, V.3
- Water bridges: A:S.188, A:G.193, A:G.193, A:D.234
VAL.11: 8 residues within 4Å:- Chain B: H.177, D.179, N.181, S.188, H.192, G.193, D.234, T.297
10 PLIP interactions:9 interactions with chain B, 1 Ligand-Ligand interactions- Hydrophobic interactions: B:T.297
- Hydrogen bonds: B:N.181, B:S.188, B:D.234, B:D.234, V.11
- Water bridges: B:S.188, B:G.193, B:G.193, B:D.234
VAL.19: 8 residues within 4Å:- Chain C: H.177, D.179, N.181, S.188, H.192, G.193, D.234, T.297
10 PLIP interactions:9 interactions with chain C, 1 Ligand-Ligand interactions- Hydrophobic interactions: C:T.297
- Hydrogen bonds: C:N.181, C:S.188, C:D.234, C:D.234, V.19
- Water bridges: C:S.188, C:G.193, C:G.193, C:D.234
- 9 x GOL: GLYCEROL(Non-functional Binders)
GOL.4: 4 residues within 4Å:- Chain A: N.53, I.59, Y.62, E.94
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:E.94
- Water bridges: A:R.54, A:R.54
GOL.5: 7 residues within 4Å:- Chain A: E.97, D.100, P.101, Q.102, M.106, K.107, W.108
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:D.100, A:M.106, A:W.108
- Water bridges: A:R.103
GOL.6: 3 residues within 4Å:- Chain A: D.86, C.87, G.88
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:D.86
GOL.12: 4 residues within 4Å:- Chain B: N.53, I.59, Y.62, E.94
3 PLIP interactions:3 interactions with chain B- Hydrogen bonds: B:E.94
- Water bridges: B:R.54, B:R.54
GOL.13: 7 residues within 4Å:- Chain B: E.97, D.100, P.101, Q.102, M.106, K.107, W.108
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:D.100, B:M.106, B:W.108
- Water bridges: B:R.103
GOL.14: 3 residues within 4Å:- Chain B: D.86, C.87, G.88
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:D.86
GOL.20: 4 residues within 4Å:- Chain C: N.53, I.59, Y.62, E.94
3 PLIP interactions:3 interactions with chain C- Hydrogen bonds: C:E.94
- Water bridges: C:R.54, C:R.54
GOL.21: 7 residues within 4Å:- Chain C: E.97, D.100, P.101, Q.102, M.106, K.107, W.108
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:D.100, C:M.106, C:W.108
- Water bridges: C:R.103
GOL.22: 3 residues within 4Å:- Chain C: D.86, C.87, G.88
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:D.86
- 6 x IMD: IMIDAZOLE(Non-covalent)
IMD.7: 3 residues within 4Å:- Chain A: I.91, P.92, E.94
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:P.92
- Water bridges: A:E.94
IMD.8: 2 residues within 4Å:- Chain A: E.66, R.69
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:E.66
IMD.15: 3 residues within 4Å:- Chain B: I.91, P.92, E.94
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:P.92
- Water bridges: B:E.94
IMD.16: 2 residues within 4Å:- Chain B: E.66, R.69
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:E.66
IMD.23: 3 residues within 4Å:- Chain C: I.91, P.92, E.94
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:P.92
- Water bridges: C:E.94
IMD.24: 2 residues within 4Å:- Chain C: E.66, R.69
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:E.66
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hai, Y. et al., Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis. Biochemistry (2014)
- Release Date
- 2014-07-16
- Peptides
- Arginase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.83 Å
- Oligo State
- homo-trimer
- Ligands
- 6 x MN: MANGANESE (II) ION(Non-covalent)
- 3 x VAL: VALINE(Non-covalent)
- 9 x GOL: GLYCEROL(Non-functional Binders)
- 6 x IMD: IMIDAZOLE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Hai, Y. et al., Crystal Structure of Schistosoma mansoni Arginase, a Potential Drug Target for the Treatment of Schistosomiasis. Biochemistry (2014)
- Release Date
- 2014-07-16
- Peptides
- Arginase: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A