SMTL ID : 4qsj.2 (1 other biounit)

Crystal structure of human carbonic anhydrase isozyme XIII with 2-chloro-4-{[(4-methyl-6-oxo-1,6-dihydropyrimidin-2-yl)thio]acetyl}benzenesulfonamide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.96, H.98, H.121, T.201 Ligands: EWW.2 3 PLIP interactions: 3 interactions with chain A Metal complexes: A:H.96, A:H.98, A:H.121

1 x EWW: 2-chloro-4-{[(4-methyl-6-oxo-1,6-dihydropyrimidin-2-yl)sulfanyl]acetyl}benzenesulfonamide(Non-covalent)

EWW.2: 16 residues within 4Å: Chain A: H.96, H.98, H.121, V.123, F.133, V.134, A.137, H.138, V.145, S.199, L.200, T.201, V.202, P.204, W.211 Ligands: ZN.1 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.200, A:V.202 Hydrogen bonds: A:T.201, A:T.201 Water bridges: A:Q.94, A:Q.94 pi-Stacking: A:F.133

1 x NI: NICKEL (II) ION(Non-covalent)

NI.3: 5 residues within 4Å: Chain A: G.100, S.101, H.105, S.245, H.247 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Kisonaite, M. et al., Intrinsic Thermodynamics and Structure Correlation of Benzenesulfonamides with a Pyrimidine Moiety Binding to Carbonic Anhydrases I, II, VII, XII, and XIII. Plos One (2014)

Release Date

2015-01-21

Peptides

Carbonic anhydrase 13: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Carbonic anhydrase 13

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