SMTL ID : 5ogj.1 (1 other biounit)

Crystal structure of human carbonic anhydrase isozyme XIII with 2-(Cyclooctylamino)-3,5,6-trifluoro-4-[(2-hydroxyethyl)thio]benzenesulfonamide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.06 Å

Oligo State

monomer

Ligands

1 x ZN: ZINC ION(Non-covalent)

ZN.1: 5 residues within 4Å: Chain A: H.96, H.98, H.121, T.201 Ligands: ACT.5 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:H.96, A:H.98, A:H.121, H2O.1

2 x CIT: CITRIC ACID(Non-functional Binders)

CIT.2: 6 residues within 4Å: Chain A: G.100, S.101, H.105, S.245, H.247, P.249 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:S.101, A:S.245, A:H.247 Water bridges: A:S.101, A:S.101, A:A.102, A:A.102 Salt bridges: A:H.105, A:H.105, A:H.247 CIT.3: 5 residues within 4Å: Chain A: M.1, R.10, E.11, H.12, N.13 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:R.10 Hydrogen bonds: A:M.1, A:R.10, A:H.12, A:N.13 Water bridges: A:E.11, A:H.12 Salt bridges: A:H.12, A:H.12

1 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.4: 5 residues within 4Å: Chain A: D.28, Q.29, L.253, K.254, R.256 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.253

1 x ACT: ACETATE ION(Non-functional Binders)

ACT.5: 8 residues within 4Å: Chain A: H.96, H.121, V.145, L.200, T.201, W.211 Ligands: ZN.1, V90.8 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:V.145, A:L.200, A:W.211 Hydrogen bonds: A:T.201 Salt bridges: A:H.96, A:H.121

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.6: 3 residues within 4Å: Chain A: P.197, R.256, K.257 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:K.257 Water bridges: A:K.257 EDO.7: 2 residues within 4Å: Chain A: Y.116, P.217 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:Y.116

1 x V90: 2-(cyclooctylamino)-3,5,6-trifluoro-4-[(2-hydroxyethyl)sulfanyl]benzenesulfonamide(Non-covalent)

V90.8: 12 residues within 4Å: Chain A: R.93, Q.94, H.96, V.123, F.133, V.134, A.137, H.138, L.200, V.202, L.206 Ligands: ACT.5 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.133, A:A.137, A:L.206 Hydrogen bonds: A:R.93, A:Q.94 Water bridges: A:N.69, A:N.69, A:N.69, A:D.71, A:R.93, A:Q.94

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Smirnov, A. et al., Crystal structure of human carbonic anhydrase isozyme XIII with 2-(Cyclooctylamino)-3,5,6-trifluoro-4-[(2-hydroxyethyl)thio]benzenesulfonamide. To be published

Release Date

2018-08-01

Peptides

Carbonic anhydrase 13: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Carbonic anhydrase 13

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