- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-dimer
- Ligands
- 44 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 10 x SO4: SULFATE ION(Non-functional Binders)
SO4.23: 4 residues within 4Å:- Chain A: R.192, R.195, H.233, Y.234
6 PLIP interactions:1 interactions with chain B, 5 interactions with chain A- Water bridges: B:H.233, A:R.192, A:R.195, A:Y.234
- Salt bridges: A:R.192, A:R.195
SO4.24: 5 residues within 4Å:- Chain A: D.284, K.286, P.312, Y.313, Q.316
6 PLIP interactions:6 interactions with chain A- Hydrogen bonds: A:N.124, A:D.284, A:Y.313
- Water bridges: A:K.286, A:Q.316
- Salt bridges: A:K.286
SO4.25: 4 residues within 4Å:- Chain A: R.78, Y.140, A.326, E.327
3 PLIP interactions:3 interactions with chain A- Hydrogen bonds: A:Y.140, A:E.327
- Salt bridges: A:R.78
SO4.26: 4 residues within 4Å:- Chain A: V.15, R.16, S.30, Y.31
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:Y.31
- Salt bridges: A:R.16
SO4.29: 3 residues within 4Å:- Chain A: R.149, L.171, R.173
7 PLIP interactions:7 interactions with chain A- Hydrogen bonds: A:L.171
- Water bridges: A:R.71, A:R.149, A:V.189, A:V.189
- Salt bridges: A:R.149, A:R.173
SO4.53: 4 residues within 4Å:- Chain B: R.192, R.195, H.233, Y.234
7 PLIP interactions:2 interactions with chain A, 5 interactions with chain B- Water bridges: A:H.233, A:H.233, B:R.192, B:R.195, B:Y.234
- Salt bridges: B:R.192, B:R.195
SO4.54: 5 residues within 4Å:- Chain B: D.284, K.286, P.312, Y.313, Q.316
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:N.124, B:D.284, B:Y.313
- Water bridges: B:E.315, B:E.315, B:Q.316
- Salt bridges: B:K.286
SO4.55: 4 residues within 4Å:- Chain B: R.78, Y.140, A.326, E.327
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:Y.140, B:Y.140, B:E.327
- Salt bridges: B:R.78
SO4.56: 4 residues within 4Å:- Chain B: V.15, R.16, S.30, Y.31
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:Y.31
- Salt bridges: B:R.16
SO4.59: 3 residues within 4Å:- Chain B: R.149, L.171, R.173
7 PLIP interactions:7 interactions with chain B- Hydrogen bonds: B:L.171
- Water bridges: B:R.71, B:R.149, B:V.189, B:V.189
- Salt bridges: B:R.149, B:R.173
- 4 x CL: CHLORIDE ION(Non-functional Binders)
CL.27: 7 residues within 4Å:- Chain A: H.233, Y.234, L.235
- Chain B: H.233, Y.234, L.235
- Ligands: CL.57
Ligand excluded by PLIPCL.28: 4 residues within 4Å:- Chain A: N.202, I.256, I.257, N.258
Ligand excluded by PLIPCL.57: 7 residues within 4Å:- Chain A: H.233, Y.234, L.235
- Chain B: H.233, Y.234, L.235
- Ligands: CL.27
Ligand excluded by PLIPCL.58: 4 residues within 4Å:- Chain B: N.202, I.256, I.257, N.258
Ligand excluded by PLIP- 2 x 390: 4-{2-[(2-chloro-4-fluorophenyl)amino]-5-methylpyrimidin-4-yl}-N-[(1S)-1-(3-chlorophenyl)-2-hydroxyethyl]-1H-pyrrole-2-carboxamide(Non-covalent)
390.30: 23 residues within 4Å:- Chain A: I.32, E.34, G.35, A.36, Y.37, G.38, M.39, V.40, A.53, K.55, I.57, Q.106, D.107, L.108, M.109, E.110, T.111, D.112, K.115, N.155, L.157, C.167, D.168
16 PLIP interactions:16 interactions with chain A- Hydrophobic interactions: A:I.32, A:V.40, A:A.53, A:I.57, A:L.157
- Hydrogen bonds: A:M.109, A:M.109
- Water bridges: A:K.152, A:K.152, A:K.152, A:K.152, A:S.154, A:S.154, A:S.154, A:D.168
- pi-Cation interactions: A:K.55
390.60: 23 residues within 4Å:- Chain B: I.32, E.34, G.35, A.36, Y.37, G.38, M.39, V.40, A.53, K.55, I.57, Q.106, D.107, L.108, M.109, E.110, T.111, D.112, K.115, N.155, L.157, C.167, D.168
17 PLIP interactions:17 interactions with chain B- Hydrophobic interactions: B:I.32, B:V.40, B:A.53, B:I.57, B:L.157
- Hydrogen bonds: B:M.109, B:M.109, B:D.168
- Water bridges: B:K.152, B:K.152, B:K.152, B:K.152, B:S.154, B:S.154, B:S.154, B:D.168
- pi-Cation interactions: B:K.55
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chaikuad, A. et al., A unique inhibitor binding site in ERK1/2 is associated with slow binding kinetics. Nat.Chem.Biol. (2014)
- Release Date
- 2014-07-23
- Peptides
- Mitogen-activated protein kinase 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.50 Å
- Oligo State
- homo-dimer
- Ligands
- 44 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 10 x SO4: SULFATE ION(Non-functional Binders)
- 4 x CL: CHLORIDE ION(Non-functional Binders)
- 2 x 390: 4-{2-[(2-chloro-4-fluorophenyl)amino]-5-methylpyrimidin-4-yl}-N-[(1S)-1-(3-chlorophenyl)-2-hydroxyethyl]-1H-pyrrole-2-carboxamide(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Chaikuad, A. et al., A unique inhibitor binding site in ERK1/2 is associated with slow binding kinetics. Nat.Chem.Biol. (2014)
- Release Date
- 2014-07-23
- Peptides
- Mitogen-activated protein kinase 1: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
A