- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x 3JN: 3-[(1E)-3-carboxyprop-1-en-1-yl]benzene-1,2-dicarboxylic acid(Non-covalent)
3JN.7: 16 residues within 4Å:- Chain A: S.74, N.94, T.95, S.96, R.99, N.127, C.128, Q.155, G.159, A.160, I.209, E.220, K.223, R.245, H.252
- Ligands: NAP.8
11 PLIP interactions:11 interactions with chain A- Hydrogen bonds: A:S.74, A:S.96, A:N.127, A:Q.155
- Water bridges: A:S.74, A:S.74
- Salt bridges: A:R.99, A:K.223, A:K.223, A:R.245, A:H.252
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
NAP.8: 27 residues within 4Å:- Chain A: G.9, A.10, T.11, G.12, A.13, V.14, A.36, S.37, R.39, S.40, T.57, S.71, A.72, G.73, T.76, N.94, T.95, C.125, P.126, N.127, C.128, S.158, G.161, M.162, G.329, A.330
- Ligands: 3JN.7
25 PLIP interactions:25 interactions with chain A- Hydrophobic interactions: A:V.14
- Hydrogen bonds: A:G.9, A:T.11, A:T.11, A:G.12, A:A.13, A:V.14, A:S.37, A:S.37, A:R.39, A:S.40, A:S.40, A:S.40, A:N.94, A:N.94, A:C.128, A:M.162
- Water bridges: A:G.15, A:A.72, A:S.74, A:S.74, A:Y.80, A:Y.80, A:G.163
- Salt bridges: A:R.39
NAP.13: 17 residues within 4Å:- Chain B: G.9, A.10, T.11, G.12, A.13, A.36, S.37, R.39, S.40, T.57, S.71, A.72, T.76, A.160, G.161, M.162, G.163
20 PLIP interactions:20 interactions with chain B- Hydrogen bonds: B:G.9, B:T.11, B:T.11, B:T.11, B:G.12, B:A.13, B:S.37, B:S.37, B:R.39, B:S.40, B:S.40, B:S.40, B:S.40, B:T.76, B:M.162, B:G.163
- Water bridges: B:V.14, B:V.14, B:T.57, B:Y.80
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pavlovsky, A.G. et al., A cautionary tale of structure-guided inhibitor development against an essential enzyme in the aspartate-biosynthetic pathway. Acta Crystallogr.,Sect.D (2014)
- Release Date
- 2014-12-10
- Peptides
- Aspartate-semialdehyde dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-dimer
- Ligands
- 8 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- 2 x NA: SODIUM ION(Non-functional Binders)
- 1 x 3JN: 3-[(1E)-3-carboxyprop-1-en-1-yl]benzene-1,2-dicarboxylic acid(Non-covalent)
- 2 x NAP: NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Pavlovsky, A.G. et al., A cautionary tale of structure-guided inhibitor development against an essential enzyme in the aspartate-biosynthetic pathway. Acta Crystallogr.,Sect.D (2014)
- Release Date
- 2014-12-10
- Peptides
- Aspartate-semialdehyde dehydrogenase: AB
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
B