SMTL ID : 4r8w.1

Crystal structure of H7 hemagglutinin from A/Anhui/1/2013 in complex with a neutralizing antibody CT149

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.80 Å

Oligo State

hetero-3-3-3-3-mer

Ligands

9 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: N.28, T.30, T.309 No protein-ligand interaction detected (PLIP) NAG.2: 1 residues within 4Å: Chain A: N.231 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:N.231 NAG.3: 4 residues within 4Å: Chain B: E.72, K.75, N.79, N.82 3 PLIP interactions: 3 interactions with chain B Hydrophobic interactions: B:K.75 Hydrogen bonds: B:K.75, B:N.82 NAG.4: 3 residues within 4Å: Chain E: N.28, T.30, T.309 No protein-ligand interaction detected (PLIP) NAG.5: 1 residues within 4Å: Chain E: N.231 1 PLIP interactions: 1 interactions with chain E Hydrogen bonds: E:N.231 NAG.6: 4 residues within 4Å: Chain F: E.72, K.75, N.79, N.82 3 PLIP interactions: 3 interactions with chain F Hydrophobic interactions: F:K.75 Hydrogen bonds: F:K.75, F:N.82 NAG.7: 3 residues within 4Å: Chain I: N.28, T.30, T.309 No protein-ligand interaction detected (PLIP) NAG.8: 1 residues within 4Å: Chain I: N.231 1 PLIP interactions: 1 interactions with chain I Hydrogen bonds: I:N.231 NAG.9: 4 residues within 4Å: Chain J: E.72, K.75, N.79, N.82 3 PLIP interactions: 3 interactions with chain J Hydrophobic interactions: J:K.75 Hydrogen bonds: J:K.75, J:N.82

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wu, Y. et al., A potent broad-spectrum protective human monoclonal antibody crosslinking two haemagglutinin monomers of influenza A virus. Nat Commun (2015)

Release Date

2015-08-26

Peptides

Hemagglutinin: AEI
Hemagglutinin: BFJ
Heavy chain of neutralizing antibody CT149: CGK
Light chain of neutralizing antibody CT149: DHL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

E
A

I
A

B
B

F
B

J
B

C
H

G
H

K
H

D
L

H
L

L
L

Hemagglutinin

Hemagglutinin

Heavy chain of neutralizing antibody CT149

Light chain of neutralizing antibody CT149

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