SMTL ID : 4rc9.1

Crystal Structure of the type II Dehydroquinate dehydratase from Acinetobacter baumannii at 2.03A Resolution

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.05 Å

Oligo State

homo-12-mer

Ligands

12 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 6 residues within 4Å: Chain A: L.13, N.76, A.78, H.102, L.103, S.104 4 PLIP interactions: 4 interactions with chain A Hydrogen bonds: A:N.76, A:L.103, A:S.104, A:S.104 SO4.2: 5 residues within 4Å: Chain B: N.76, A.78, H.102, L.103, S.104 4 PLIP interactions: 4 interactions with chain B Hydrogen bonds: B:N.76, B:L.103, B:S.104 Salt bridges: B:H.102 SO4.3: 5 residues within 4Å: Chain C: N.76, A.78, H.102, L.103, S.104 6 PLIP interactions: 6 interactions with chain C Hydrogen bonds: C:N.76, C:N.76, C:L.103, C:S.104, C:S.104 Salt bridges: C:H.102 SO4.4: 6 residues within 4Å: Chain D: L.13, N.76, A.78, H.102, L.103, S.104 5 PLIP interactions: 5 interactions with chain D Hydrogen bonds: D:N.76, D:N.76, D:L.103, D:S.104 Salt bridges: D:H.102 SO4.5: 6 residues within 4Å: Chain E: L.13, N.76, A.78, H.102, L.103, S.104 5 PLIP interactions: 5 interactions with chain E Hydrogen bonds: E:N.76, E:L.103, E:S.104, E:S.104 Salt bridges: E:H.102 SO4.6: 6 residues within 4Å: Chain F: L.13, N.76, A.78, H.102, L.103, S.104 6 PLIP interactions: 6 interactions with chain F Hydrogen bonds: F:N.76, F:L.103, F:S.104 Water bridges: F:A.78, F:R.109 Salt bridges: F:H.102 SO4.7: 6 residues within 4Å: Chain G: L.13, N.76, A.78, H.102, L.103, S.104 6 PLIP interactions: 6 interactions with chain G Hydrogen bonds: G:N.76, G:N.76, G:L.103, G:S.104, G:S.104 Salt bridges: G:H.102 SO4.8: 5 residues within 4Å: Chain H: L.13, N.76, H.102, L.103, S.104 4 PLIP interactions: 4 interactions with chain H Hydrogen bonds: H:N.76, H:L.103, H:S.104 Salt bridges: H:H.102 SO4.9: 6 residues within 4Å: Chain I: L.13, N.76, A.78, H.102, L.103, S.104 5 PLIP interactions: 5 interactions with chain I Hydrogen bonds: I:N.76, I:L.103, I:S.104, I:S.104 Salt bridges: I:H.102 SO4.10: 5 residues within 4Å: Chain J: L.13, N.76, H.102, L.103, S.104 4 PLIP interactions: 4 interactions with chain J Hydrogen bonds: J:N.76, J:H.102, J:L.103, J:S.104 SO4.11: 5 residues within 4Å: Chain K: N.76, A.78, H.102, L.103, S.104 5 PLIP interactions: 5 interactions with chain K Hydrogen bonds: K:N.76, K:N.76, K:L.103, K:S.104 Salt bridges: K:H.102 SO4.12: 6 residues within 4Å: Chain L: L.13, N.76, A.78, H.102, L.103, S.104 5 PLIP interactions: 5 interactions with chain L Hydrogen bonds: L:N.76, L:N.76, L:L.103, L:S.104 Salt bridges: L:H.102

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Iqbal, N. et al., Crystal Structure of the type II Dehydroquinate dehydratase from Acinetobacter baumannii at 2.03 A Resolution. To be Published

Release Date

2014-10-29

Peptides

3-dehydroquinate dehydratase: ABCDEFGHIJKL

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

G
G

H
H

I
I

J
J

K
K

L
L

3-dehydroquinate dehydratase

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